Gm9293 Pseudogene Detail

Summary

• Symbol
  Gm9293
• Name
  predicted gene 9293

• Feature Type
  pseudogene
• IDs
  MGI:3648896
  NCBI Gene: 668664
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:23140770-23143394 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 8.38 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  30 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648896	pseudogene	Chr12:23140035-23153524 (-)
129S1/SvImJ	ENSMUSG00200023401	pseudogene	Chr12:16167026-16167583 (-)
A/J	ENSMUSG00195020092	pseudogene	Chr12:17516950-17519511 (+)
A/J	ENSMUSG00195020077	pseudogene	Chr12:15088033-15088581 (+)
AKR/J	ENSMUSG00220027792	pseudogene	Chr12:16277405-16280028 (+)
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175023106	pseudogene	Chr12:20892491-20893048 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210008524	pseudogene	Chr12:15114364-15114912 (+)
CBA/J	ENSMUSG00210008529	pseudogene	Chr12:16267515-16267537 (-)
DBA/2J	ENSMUSG00185003919	pseudogene	Chr12:17302032-17304656 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000006681	pseudogene	Chr12:22056292-22058916 (-)
LP/J	ENSMUSG00230007517	pseudogene	Chr12:23670283-23672907 (+)
LP/J	ENSMUSG00230007527	pseudogene	Chr12:24268766-24271390 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225034598	pseudogene	Chr12:26451854-26454478 (-)
NZO/HlLtJ	ENSMUSG00225034589	pseudogene	Chr12:25620662-25623286 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm9293
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00000113751 (Evidence)
• NCBI Gene
  668664

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113751	Ensembl Gene Model | MGI Sequence Detail	2625	C57BL/6J
transcript	ENSMUST00000223096	Ensembl | MGI Sequence Detail	306	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;