Gm8417 Pseudogene Detail

Summary

• Symbol
  Gm8417
• Name
  predicted gene 8417

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3648869
  NCBI Gene: 667006
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:50040242-50044750 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 25.83 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  259 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648869	pseudogene	Chr14:50040242-50063973 (+)
129S1/SvImJ	ENSMUSG00200016975	pseudogene	Chr14:38912096-38935802 (+)
A/J	ENSMUSG00195025399	pseudogene	Chr14:39122291-39145997 (+)
AKR/J	ENSMUSG00220043326	pseudogene	Chr14:38495950-38519656 (+)
BALB/cJ	ENSMUSG00180045932	pseudogene	Chr14:38722690-38746392 (+)
C3H/HeJ	ENSMUSG00175028586	pseudogene	Chr14:40411647-40435353 (+)
C57BL/6NJ	ENSMUSG00215039737	pseudogene	Chr14:39064465-39088196 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011111	pseudogene	Chr14:40878976-40902692 (+)
CBA/J	ENSMUSG00210045375	pseudogene	Chr14:39048222-39071928 (+)
DBA/2J	ENSMUSG00185055628	pseudogene	Chr14:43828339-43852045 (+)
FVB/NJ	ENSMUSG00205046672	pseudogene	Chr14:38248478-38272482 (+)
JF1/MsJ	ENSUMUG00000050122	pseudogene	Chr14:55840796-55864531 (+)
LP/J	ENSMUSG00230053327	pseudogene	Chr14:56047680-56071386 (+)
NOD/ShiLtJ	ENSMUSG00190045114	pseudogene	Chr14:38725602-38749606 (+)
NZO/HlLtJ	ENSMUSG00225052197	pseudogene	Chr14:46345781-46369487 (+)
PWK/PhJ	ENSLUMG00010041799	pseudogene	Chr14:38317492-38341198 (+)
SPRET/EiJ	ENSMSPG00010048308	pseudogene	Chr14:41642013-41665912 (+)
WSB/EiJ	ENSIUOG00005043924	pseudogene	Chr14:38609069-38632775 (+)

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm8417
• Find Mice (IMSR)
  6 strains or lines available

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000115212 (Evidence), ENSMUSG00000121358 (Evidence)
• NCBI Gene
  667006

Representative Sequences			Length	Strain/Species
genomic	667006	NCBI Gene Model | MGI Sequence Detail	4509	C57BL/6J
transcript	NR_164329	RefSeq | MGI Sequence Detail	1597	C57BL/6

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;