Gm5822 Pseudogene Detail

Summary

• Symbol
  Gm5822
• Name
  predicted gene 5822

• Feature Type
  pseudogene
• IDs
  MGI:3648836
  NCBI Gene: 545262
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:28839730-28841107 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 23.53 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  160 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648836	pseudogene	Chr19:28839412-28841166 (-)
129S1/SvImJ	ENSMUSG00200021177	pseudogene	Chr19:25551246-25552624 (-)
A/J	ENSMUSG00195037502	pseudogene	Chr19:25725075-25726452 (-)
AKR/J	ENSMUSG00220019581	pseudogene	Chr19:25785432-25786810 (-)
BALB/cJ	ENSMUSG00180013995	pseudogene	Chr19:26053843-26055220 (-)
C3H/HeJ	ENSMUSG00175026615	pseudogene	Chr19:25430043-25431420 (-)
C57BL/6NJ	ENSMUSG00215029498	pseudogene	Chr19:25470467-25471844 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018528	pseudogene	Chr19:25296674-25298028 (-)
CBA/J	ENSMUSG00210014993	pseudogene	Chr19:25661011-25662388 (-)
DBA/2J	ENSMUSG00185026032	pseudogene	Chr19:26047760-26049137 (-)
FVB/NJ	ENSMUSG00205013534	pseudogene	Chr19:25441548-25442925 (-)
JF1/MsJ	ENSUMUG00000037656	pseudogene	Chr19:26257497-26258876 (-)
LP/J	ENSMUSG00230029935	pseudogene	Chr19:26860573-26861951 (-)
NOD/ShiLtJ	ENSMUSG00190022136	pseudogene	Chr19:25424515-25425892 (-)
NZO/HlLtJ	ENSMUSG00225029481	pseudogene	Chr19:30617271-30618648 (-)
PWK/PhJ	ENSLUMG00010034436	pseudogene	Chr19:25631638-25633017 (-)
SPRET/EiJ	ENSMSPG00010037621	pseudogene	Chr19:25596238-25597604 (-)
WSB/EiJ	ENSIUOG00005028178	pseudogene	Chr19:25160689-25162067 (-)

Homology

• Gene Tree
  Gm5822
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000089993 (Evidence)
• NCBI Gene
  545262

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000089993	Ensembl Gene Model | MGI Sequence Detail	1378	C57BL/6J
transcript	ENSMUST00000161562	Ensembl | MGI Sequence Detail	1378	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm5822:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr158735	Chr19:28841166-28841167 (-)	-60 bp