Gm8390 Pseudogene Detail

Summary

• Symbol
  Gm8390
• Name
  predicted gene 8390

• Feature Type
  pseudogene
• IDs
  MGI:3648802
  NCBI Gene: 666969
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:44194665-44195271 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 23.74 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  207 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648802	pseudogene	Chr18:44194665-44195271 (+)
129S1/SvImJ	ENSMUSG00200030957	pseudogene	Chr18:41235208-41235814 (+)
A/J	ENSMUSG00195025204	pseudogene	Chr18:41395871-41396477 (+)
AKR/J	ENSMUSG00220021368	pseudogene	Chr18:41357483-41358089 (+)
BALB/cJ	ENSMUSG00180007892	pseudogene	Chr18:41853225-41853831 (+)
C3H/HeJ	ENSMUSG00175011049	pseudogene	Chr18:41371954-41372560 (+)
C57BL/6NJ	ENSMUSG00215008886	pseudogene	Chr18:41080162-41080768 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013737	pseudogene	Chr18:40918705-40919311 (+)
CBA/J	ENSMUSG00210022496	pseudogene	Chr18:41418955-41419561 (+)
DBA/2J	ENSMUSG00185028825	pseudogene	Chr18:41327690-41328296 (+)
FVB/NJ	ENSMUSG00205015991	pseudogene	Chr18:40959347-40959953 (+)
JF1/MsJ	ENSUMUG00000029590	pseudogene	Chr18:41458832-41459442 (+)
LP/J	ENSMUSG00230028936	pseudogene	Chr18:43424862-43425468 (+)
NOD/ShiLtJ	ENSMUSG00190027826	pseudogene	Chr18:41086439-41087045 (+)
NZO/HlLtJ	ENSMUSG00225027526	pseudogene	Chr18:43294815-43295421 (+)
PWK/PhJ	ENSLUMG00010022121	pseudogene	Chr18:41551091-41551706 (+)
SPRET/EiJ	ENSMSPG00010013233	pseudogene	Chr18:41678731-41679343 (+)
WSB/EiJ	ENSIUOG00005009575	pseudogene	Chr18:41051075-41051681 (+)

Homology

• Gene Tree
  Gm8390
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000118199 (Evidence)
• NCBI Gene
  666969

Representative Sequences			Length	Strain/Species
genomic	666969	NCBI Gene Model | MGI Sequence Detail	607	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;