Gm6757 Pseudogene Detail

Summary

• Symbol
  Gm6757
• Name
  predicted gene 6757

• Feature Type
  pseudogene
• IDs
  MGI:3648801
  NCBI Gene: 627430
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:49438183-49439888 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 25.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  165 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648801	pseudogene	Chr1:49437943-49439958 (-)
129S1/SvImJ	ENSMUSG00200002029	pseudogene	Chr1:46931914-46933814 (-)
A/J	ENSMUSG00195002021	pseudogene	Chr1:46813052-46814757 (-)
AKR/J	ENSMUSG00220004046	pseudogene	Chr1:46578997-46580918 (-)
BALB/cJ	ENSMUSG00180003373	pseudogene	Chr1:46726754-46728660 (-)
C3H/HeJ	ENSMUSG00175000122	pseudogene	Chr1:46842740-46844445 (-)
C57BL/6NJ	ENSMUSG00215003144	pseudogene	Chr1:46766117-46767822 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009107	pseudogene	Chr1:44475481-44476904 (+)
CAST/EiJ	ENSTCUG00005000928	pseudogene	Chr1:46639070-46640774 (-)
CBA/J	ENSMUSG00210029302	pseudogene	Chr1:46546520-46548225 (-)
DBA/2J	ENSMUSG00185030732	pseudogene	Chr1:47666061-47667766 (-)
FVB/NJ	ENSMUSG00205004276	pseudogene	Chr1:46492571-46494276 (-)
JF1/MsJ	ENSUMUG00000001951	pseudogene	Chr1:46582281-46583985 (-)
LP/J	ENSMUSG00230001494	pseudogene	Chr1:47660133-47661838 (-)
NOD/ShiLtJ	ENSMUSG00190002598	pseudogene	Chr1:46684490-46686195 (-)
NZO/HlLtJ	ENSMUSG00225001117	pseudogene	Chr1:50862343-50864048 (-)
PWK/PhJ	ENSLUMG00010002827	pseudogene	Chr1:46166247-46167952 (-)
SPRET/EiJ	ENSMSPG00010013269	pseudogene	Chr1:47774886-47776579 (-)
WSB/EiJ	ENSIUOG00005003692	pseudogene	Chr1:46367678-46369383 (-)

Homology

• Gene Tree
  Gm6757
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm6757
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000099627 (Evidence)
• NCBI Gene
  627430

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099627	Ensembl Gene Model | MGI Sequence Detail	1706	C57BL/6J
transcript	ENSMUST00000189810	Ensembl | MGI Sequence Detail	1706	Not Applicable

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm6757:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr11561	Chr1:49439946-49439958 (-)	-64 bp