Gm8118 Pseudogene Detail

Summary

• Symbol
  Gm8118
• Name
  predicted gene 8118

• Feature Type
  pseudogene
• IDs
  MGI:3648798
  NCBI Gene: 666459
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:22504100-22504944 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 13.56 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648798	pseudogene	Chr16:22504100-22504944 (-)
129S1/SvImJ	ENSMUSG00200046991	pseudogene	Chr16:19503966-19504810 (-)
A/J	ENSMUSG00195037582	pseudogene	Chr16:19062290-19063134 (-)
AKR/J	ENSMUSG00220045973	pseudogene	Chr16:19381693-19382537 (-)
BALB/cJ	ENSMUSG00180041059	pseudogene	Chr16:19302887-19303731 (-)
C3H/HeJ	ENSMUSG00175051613	pseudogene	Chr16:19447824-19448668 (-)
C57BL/6NJ	ENSMUSG00215042739	pseudogene	Chr16:19175035-19175879 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045713	pseudogene	Chr16:19789882-19790724 (-)
CBA/J	ENSMUSG00210047746	pseudogene	Chr16:19469554-19470398 (-)
DBA/2J	ENSMUSG00185035752	pseudogene	Chr16:19408303-19409147 (-)
FVB/NJ	ENSMUSG00205047895	pseudogene	Chr16:19404213-19405057 (-)
JF1/MsJ	ENSUMUG00000053434	pseudogene	Chr16:19632538-19633382 (-)
LP/J	ENSMUSG00230033625	pseudogene	Chr16:21987416-21988260 (-)
NOD/ShiLtJ	ENSMUSG00190049479	pseudogene	Chr16:19549765-19550609 (-)
NZO/HlLtJ	ENSMUSG00225038950	pseudogene	Chr16:25238492-25239336 (-)
PWK/PhJ	ENSLUMG00010049024	pseudogene	Chr16:19464672-19465516 (-)
SPRET/EiJ	ENSMSPG00010047879	pseudogene	Chr16:19334456-19335302 (-)
WSB/EiJ	ENSIUOG00005045709	pseudogene	Chr16:19629558-19630402 (-)

Homology

• Gene Tree
  Gm8118
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000116603 (Evidence)
• NCBI Gene
  666459

Representative Sequences			Length	Strain/Species
genomic	666459	NCBI Gene Model | MGI Sequence Detail	845	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;