Gm8115 Pseudogene Detail

Summary

• Symbol
  Gm8115
• Name
  predicted gene 8115

• Feature Type
  pseudogene
• IDs
  MGI:3648794
  NCBI Gene: 666455
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:57418659-57419347 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 30.92 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  149 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648794	pseudogene	Chr5:57418614-57419349 (+)
129S1/SvImJ	ENSMUSG00200000082	pseudogene	Chr5:52970777-52971512 (+)
A/J	ENSMUSG00195000529	pseudogene	Chr5:52363631-52364366 (+)
AKR/J	ENSMUSG00220007197	pseudogene	Chr5:52429269-52430004 (+)
BALB/cJ	ENSMUSG00180006629	pseudogene	Chr5:52121785-52122520 (+)
C3H/HeJ	ENSMUSG00175001726	pseudogene	Chr5:54164161-54164896 (+)
C57BL/6NJ	ENSMUSG00215002830	pseudogene	Chr5:52921088-52921823 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011607	pseudogene	Chr5:51020691-51021425 (+)
CAST/EiJ	ENSTCUG00005000704	pseudogene	Chr5:52268541-52269276 (+)
CBA/J	ENSMUSG00210000334	pseudogene	Chr5:53122756-53123491 (+)
DBA/2J	ENSMUSG00185000139	pseudogene	Chr5:54985134-54985869 (+)
FVB/NJ	ENSMUSG00205011742	pseudogene	Chr5:51974434-51975169 (+)
JF1/MsJ	ENSUMUG00000001199	pseudogene	Chr5:59562167-59562902 (+)
LP/J	ENSMUSG00230010912	pseudogene	Chr5:59646635-59647370 (+)
NOD/ShiLtJ	ENSMUSG00190000729	pseudogene	Chr5:52054683-52055418 (+)
NZO/HlLtJ	ENSMUSG00225002942	pseudogene	Chr5:64775694-64776429 (+)
PWK/PhJ	ENSLUMG00010004528	pseudogene	Chr5:52170199-52170934 (+)
SPRET/EiJ	ENSMSPG00010004124	pseudogene	Chr5:53787284-53788018 (+)
WSB/EiJ	ENSIUOG00005000143	pseudogene	Chr5:55016344-55017079 (+)

Homology

• Gene Tree
  Gm8115
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm8115
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000104560 (Evidence)
• NCBI Gene
  666455

Representative Sequences			Length	Strain/Species
genomic	666455	NCBI Gene Model | MGI Sequence Detail	689	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17