Gm6332 Pseudogene Detail

Summary

• Symbol
  Gm6332
• Name
  predicted gene 6332

• Feature Type
  pseudogene
• IDs
  MGI:3648790
  NCBI Gene: 622553
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:12768645-12769327 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 8.54 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  128 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648790	pseudogene	Chr16:12768645-12769380 (-)
129S1/SvImJ	ENSMUSG00200011999	pseudogene	Chr16:9753987-9754669 (-)
A/J	ENSMUSG00195011821	pseudogene	Chr16:9313699-9314381 (-)
AKR/J	ENSMUSG00220017439	pseudogene	Chr16:9610534-9611216 (-)
BALB/cJ	ENSMUSG00180008779	pseudogene	Chr16:9555860-9556542 (-)
C3H/HeJ	ENSMUSG00175029992	pseudogene	Chr16:9719610-9720292 (-)
C57BL/6NJ	ENSMUSG00215025035	pseudogene	Chr16:9430669-9431351 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032718	pseudogene	Chr16:9637977-9638660 (-)
CBA/J	ENSMUSG00210012181	pseudogene	Chr16:9736551-9737233 (-)
DBA/2J	ENSMUSG00185010663	pseudogene	Chr16:9682101-9682783 (-)
FVB/NJ	ENSMUSG00205012873	pseudogene	Chr16:9670363-9671045 (-)
JF1/MsJ	ENSUMUG00000041175	pseudogene	Chr16:9803184-9803866 (-)
LP/J	ENSMUSG00230046604	pseudogene	Chr16:12249595-12250277 (-)
NOD/ShiLtJ	ENSMUSG00190025967	pseudogene	Chr16:9805425-9806107 (-)
NZO/HlLtJ	ENSMUSG00225032387	pseudogene	Chr16:15489361-15490043 (-)
PWK/PhJ	ENSLUMG00010017936	pseudogene	Chr16:9682116-9682798 (-)
SPRET/EiJ	ENSMSPG00010018054	pseudogene	Chr16:9644831-9645508 (-)
WSB/EiJ	ENSIUOG00005016744	pseudogene	Chr16:9758992-9759674 (-)

Homology

• Gene Tree
  Gm6332
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000116170 (Evidence)
• NCBI Gene
  622553

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116170	Ensembl Gene Model | MGI Sequence Detail	683	C57BL/6J
transcript	ENSMUST00000230534	Ensembl | MGI Sequence Detail	683	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;