Gm6586 Pseudogene Detail

Summary

• Symbol
  Gm6586
• Name
  predicted gene 6586

• Feature Type
  pseudogene
• IDs
  MGI:3648729
  NCBI Gene: 625446
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:10117328-10120641 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 3.69 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  231 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648729	pseudogene	Chr5:10116628-10120648 (+)
129S1/SvImJ	ENSMUSG00200002952	pseudogene	Chr5:6857733-6861046 (+)
A/J	ENSMUSG00195012628	pseudogene	Chr5:6825380-6828693 (+)
AKR/J	ENSMUSG00220002077	pseudogene	Chr5:6769054-6772393 (+)
BALB/cJ	ENSMUSG00180017215	pseudogene	Chr5:6577471-6580784 (+)
C3H/HeJ	ENSMUSG00175029525	pseudogene	Chr5:6768449-6771762 (+)
C57BL/6NJ	ENSMUSG00215028391	pseudogene	Chr5:7034309-7037622 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001818	pseudogene	Chr5:6910843-6914139 (+)
CBA/J	ENSMUSG00210002945	pseudogene	Chr5:7118838-7122151 (+)
DBA/2J	ENSMUSG00185030296	pseudogene	Chr5:7121065-7124378 (+)
FVB/NJ	ENSMUSG00205008238	pseudogene	Chr5:6823807-6827120 (+)
JF1/MsJ	ENSUMUG00000003974	pseudogene	Chr5:7188058-7191357 (+)
LP/J	ENSMUSG00230003455	pseudogene	Chr5:11112246-11115559 (+)
NOD/ShiLtJ	ENSMUSG00190013894	pseudogene	Chr5:6634487-6637800 (+)
NZO/HlLtJ	ENSMUSG00225008887	pseudogene	Chr5:14835602-14838930 (+)
PWK/PhJ	ENSLUMG00010020031	pseudogene	Chr5:7050588-7053891 (+)
SPRET/EiJ	ENSMSPG00010005308	pseudogene	Chr5:7064699-7067916 (+)
WSB/EiJ	ENSIUOG00005026443	pseudogene	Chr5:6850453-6853763 (+)

Homology

• Gene Tree
  Gm6586
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000091487 (Evidence)
• NCBI Gene
  625446

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091487	Ensembl Gene Model | MGI Sequence Detail	3314	C57BL/6J
transcript	ENSMUST00000167028	Ensembl | MGI Sequence Detail	643	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;