Gm6221 Pseudogene Detail

Summary

• Symbol
  Gm6221
• Name
  predicted pseudogene 6221

• Feature Type
  pseudogene
• IDs
  MGI:3648721
  NCBI Gene: 621380
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:134310605-134313701 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 57.00 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  9 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648721	pseudogene	ChrX:134310605-134313704 (+)
129S1/SvImJ	ENSMUSG00200048572	pseudogene	ChrX:113385843-113388914 (+)
A/J	ENSMUSG00195048628	pseudogene	ChrX:117225051-117228128 (+)
A/J	ENSMUSG00195049182	pseudogene	ChrX:117285609-117288674 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180039611	pseudogene	ChrX:113629895-113632975 (+)
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215045716	pseudogene	ChrX:114013270-114016361 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040986	pseudogene	ChrX:114826708-114829766 (+)
CAST/EiJ	ENSTCUG00005040971	pseudogene	ChrX:114573334-114573923 (-)
CBA/J	ENSMUSG00210040836	pseudogene	ChrX:114610344-114613407 (+)
DBA/2J	ENSMUSG00185030683	pseudogene	ChrX:128424057-128427126 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000031616	pseudogene	ChrX:147271325-147274353 (-)
JF1/MsJ	ENSUMUG00000031669	pseudogene	ChrX:147633394-147636481 (+)
LP/J	ENSMUSG00230040503	pseudogene	ChrX:135051975-135055046 (+)
NOD/ShiLtJ	ENSMUSG00190044007	pseudogene	ChrX:113862935-113866020 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010043357	pseudogene	ChrX:111844987-111847976 (-)
SPRET/EiJ	ENSMSPG00010040524	pseudogene	ChrX:116986169-116989351 (+)
WSB/EiJ	ENSIUOG00005040201	pseudogene	ChrX:114305111-114305700 (-)

Homology

• Gene Tree
  Gm6221
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm6221
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000095964 (Evidence)
• NCBI Gene
  621380

Representative Sequences			Length	Strain/Species
genomic	621380	NCBI Gene Model | MGI Sequence Detail	3097	C57BL/6J

References

• Summaries
  All 7

  Diseases 1

  Phenotypes 2
• Earliest
  J:199138 Zhou J, et al., A 1.1-Mb segmental deletion on the X chromosome causes meiotic failure in male mice. Biol Reprod. 2013 Jun;88(6):159
• Latest
  J:210663 Zhou J, et al., Respiratory failure, cleft palate and epilepsy in the mouse model of human Xq22.1 deletion syndrome. Hum Mol Genet. 2014 Jul 15;23(14):3823-9