Gm7904 Pseudogene Detail

Summary

• Symbol
  Gm7904
• Name
  predicted gene 7904

• Feature Type
  pseudogene
• IDs
  MGI:3648696
  NCBI Gene: 666043
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:21519159-21519623 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 7.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648696	pseudogene	Chr9:21518373-21519625 (-)
129S1/SvImJ	ENSMUSG00200049596	pseudogene	Chr9:18473388-18473852 (-)
A/J	ENSMUSG00195039936	pseudogene	Chr9:18309992-18310456 (-)
AKR/J	ENSMUSG00220034368	pseudogene	Chr9:18312437-18312901 (-)
BALB/cJ	ENSMUSG00180044726	pseudogene	Chr9:18444297-18444761 (-)
C3H/HeJ	ENSMUSG00175046290	pseudogene	Chr9:18406849-18407313 (-)
C57BL/6NJ	ENSMUSG00215038307	pseudogene	Chr9:18404134-18404598 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034281	pseudogene	Chr9:18456630-18457093 (-)
CBA/J	ENSMUSG00210045777	pseudogene	Chr9:18387762-18388226 (-)
DBA/2J	ENSMUSG00185026728	pseudogene	Chr9:18503072-18503536 (-)
FVB/NJ	ENSMUSG00205045115	pseudogene	Chr9:18732075-18732539 (-)
JF1/MsJ	ENSUMUG00000047757	pseudogene	Chr9:18611436-18611900 (-)
LP/J	ENSMUSG00230044718	pseudogene	Chr9:18890100-18890564 (-)
NOD/ShiLtJ	ENSMUSG00190045046	pseudogene	Chr9:18423859-18424323 (-)
NZO/HlLtJ	ENSMUSG00225051325	pseudogene	Chr9:18845050-18845514 (-)
PWK/PhJ	ENSLUMG00010047747	pseudogene	Chr9:18501093-18501557 (-)
SPRET/EiJ	ENSMSPG00010026465	pseudogene	Chr9:18733602-18734041 (-)
WSB/EiJ	ENSIUOG00005046012	pseudogene	Chr9:17971544-17972008 (-)

Homology

• Gene Tree
  Gm7904
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000111812 (Evidence)
• NCBI Gene
  666043

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111812	Ensembl Gene Model | MGI Sequence Detail	465	C57BL/6J
transcript	ENSMUST00000217049	Ensembl | MGI Sequence Detail	465	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14