Zfp975 Gene Detail

Summary

• Symbol
  Zfp975
• Name
  zinc finger protein 975
• Synonyms
  Gm5595

• Feature Type
  protein coding gene
• IDs
  MGI:3648690
  NCBI Gene: 434179
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:42309529-42342166 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 28.25 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1111 from dbSNP Build 142
• Strain Annotations
  2

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648690	protein coding gene	Chr7:42309529-42342191 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0032590	protein coding gene	Chr7:44901630-44958910 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• MGI Vertebrate Homology
  Zfp975 stringent orthology
  1 mouse;1 rat;2 zebrafish
  
• Gene Tree
  Zfp975
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  62
• Endonuclease-mediated
  1
• Gene trapped
  61
• Incidental Mutations
  Mutagenetix , APF , CvDC
• Find Mice (IMSR)
  116 strains or lines available

Expression

• Assay Results
  707
• Tissues
  1
• cDNA Data
  7
• Literature Summary
  1

Images

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  5
• UniProt
  3
• CCDS
  CCDS39926.1

• Ensembl
  ENSMUSG00000069727 (Evidence)
• NCBI Gene
  434179

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000069727	Ensembl Gene Model | MGI Sequence Detail	32638	C57BL/6J
transcript	ENSMUST00000107992	Ensembl | MGI Sequence Detail	3148	Not Applicable
polypeptide	ENSMUSP00000103626	Ensembl | MGI Sequence Detail	525	Not Applicable

Protein
Information

• UniProt
  3 Sequences
• InterPro Domains
  IPR036051 KRAB domain superfamily
  IPR001909 Krueppel-associated box
  IPR036236 Zinc finger C2H2 superfamily
  IPR013087 Zinc finger C2H2-type
  IPR050758 Zinc finger protein, C2H2-type

Molecular
Reagents

• All nucleic 7

  cDNA 7

  
  

  Microarray probesets 3

References

• Summaries
  All 20

  Developmental Gene Expression 1

  Phenotypes 7
• Earliest
  J:48249 Agata Y, et al., Rapid and efficient cloning of cDNAs encoding Kruppel-like zinc finger proteins by degenerate PCR. Gene. 1998 Jun 15;213(1-2):55-64
• Latest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

TSS for Zfp975:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr72122	Chr7:42342171-42342197 (-)	-18 bp