Gm8013 MGI Mouse Gene Detail - MGI:3648644

Sequence Map

Chr5:97069131-97082726 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648644	lncRNA gene	Chr5:97018970-97106952 (+)
129S1/SvImJ	ENSMUSG00200009890	lncRNA gene	Chr5:90749730-90774157 (+)
A/J	ENSMUSG00195026670	lncRNA gene	Chr5:90323278-90347705 (+)
AKR/J	ENSMUSG00220012354	lncRNA gene	Chr5:89782951-89807372 (+)
BALB/cJ	ENSMUSG00180027536	lncRNA gene	Chr5:90480676-90505104 (+)
C3H/HeJ	ENSMUSG00175035263	lncRNA gene	Chr5:92583745-92608173 (+)
C57BL/6NJ	ENSMUSG00215031816	lncRNA gene	Chr5:90441763-90465344 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006095	lincRNA gene	Chr5:89944687-89957209 (+)
CAST/EiJ	ENSTCUG00005037928	lncRNA gene	Chr5:89833147-89856596 (+)
CBA/J	ENSMUSG00210006510	lncRNA gene	Chr5:91355471-91379893 (+)
DBA/2J	ENSMUSG00185037134	lncRNA gene	Chr5:94271487-94295916 (+)
FVB/NJ	ENSMUSG00205032760	lncRNA gene	Chr5:90254015-90278438 (+)
JF1/MsJ	ENSUMUG00000045060	lncRNA gene	Chr5:97213193-97236618 (+)
LP/J	ENSMUSG00230029038	lncRNA gene	Chr5:98313974-98338400 (+)
NOD/ShiLtJ	ENSMUSG00190039378	lncRNA gene	Chr5:90249432-90273852 (+)
NZO/HlLtJ	ENSMUSG00225013520	lncRNA gene	Chr5:106062383-106086804 (+)
PWK/PhJ	ENSLUMG00010030749	lncRNA gene	Chr5:89351846-89375302 (+)
SPRET/EiJ	ENSMSPG00010025941	lncRNA gene	Chr5:92219337-92246632 (+)
WSB/EiJ	ENSIUOG00005031173	lncRNA gene	Chr5:92976310-92999918 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	666266	NCBI Gene Model \| MGI Sequence Detail	13596	C57BL/6J	± kb
	transcript	NR_131152	RefSeq \| MGI Sequence Detail	475	ZRU/MplStud

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Summaries

All 15

Phenotypes 6
Earliest

J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
Latest

J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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