Gm6056 Pseudogene Detail

Summary

• Symbol
  Gm6056
• Name
  predicted gene 6056

• Feature Type
  pseudogene
• IDs
  MGI:3648619
  NCBI Gene: 606521
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:51492957-51493743 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 26.12 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  190 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648619	pseudogene	Chr13:51492957-51493966 (+)
129S1/SvImJ	ENSMUSG00200036146	pseudogene	Chr13:48352617-48353403 (+)
A/J	ENSMUSG00195029923	pseudogene	Chr13:47822845-47823631 (+)
AKR/J	ENSMUSG00220009582	pseudogene	Chr13:47387656-47388440 (+)
BALB/cJ	ENSMUSG00180009187	pseudogene	Chr13:48072555-48073341 (+)
C3H/HeJ	ENSMUSG00175028854	pseudogene	Chr13:47855652-47856438 (+)
C57BL/6NJ	ENSMUSG00215008113	pseudogene	Chr13:47891916-47892702 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032498	pseudogene	Chr13:48262322-48263113 (+)
CBA/J	ENSMUSG00210028464	pseudogene	Chr13:48065864-48066650 (+)
DBA/2J	ENSMUSG00185032031	pseudogene	Chr13:48914800-48915586 (+)
FVB/NJ	ENSMUSG00205012655	pseudogene	Chr13:47720713-47721499 (+)
JF1/MsJ	ENSUMUG00000019882	pseudogene	Chr13:48314788-48315572 (+)
LP/J	ENSMUSG00230029744	pseudogene	Chr13:58235506-58236292 (+)
NOD/ShiLtJ	ENSMUSG00190012361	pseudogene	Chr13:47950054-47950840 (+)
NZO/HlLtJ	ENSMUSG00225035593	pseudogene	Chr13:51985927-51986713 (+)
PWK/PhJ	ENSLUMG00010022029	pseudogene	Chr13:47170457-47171241 (+)
SPRET/EiJ	ENSMSPG00010033728	pseudogene	Chr13:47583951-47584736 (+)
WSB/EiJ	ENSIUOG00005028062	pseudogene	Chr13:47343139-47343923 (+)

Homology

• Gene Tree
  Gm6056
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm6056
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000113426 (Evidence)
• NCBI Gene
  606521

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113426	Ensembl Gene Model | MGI Sequence Detail	787	C57BL/6J
transcript	ENSMUST00000221253	Ensembl | MGI Sequence Detail	488	Not Applicable

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69