Gm8125 Pseudogene Detail

Summary

• Symbol
  Gm8125
• Name
  predicted gene 8125

• Feature Type
  pseudogene
• IDs
  MGI:3648562
  NCBI Gene: 666479
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:79481090-79481827 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 43.77 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648562	pseudogene	Chr9:79481090-79481909 (+)
129S1/SvImJ	ENSMUSG00200019666	pseudogene	Chr9:76581644-76582375 (+)
A/J	ENSMUSG00195010861	pseudogene	Chr9:76399072-76399795 (+)
AKR/J	ENSMUSG00220015212	pseudogene	Chr9:76497019-76497742 (+)
BALB/cJ	ENSMUSG00180020798	pseudogene	Chr9:76507752-76508475 (+)
C3H/HeJ	ENSMUSG00175012061	pseudogene	Chr9:76568090-76568813 (+)
C57BL/6NJ	ENSMUSG00215023955	pseudogene	Chr9:76476856-76477593 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009517	pseudogene	Chr9:76143202-76143923 (+)
CBA/J	ENSMUSG00210013329	pseudogene	Chr9:76599435-76600158 (+)
DBA/2J	ENSMUSG00185008513	pseudogene	Chr9:76627829-76628552 (+)
FVB/NJ	ENSMUSG00205034547	pseudogene	Chr9:76782234-76782957 (+)
JF1/MsJ	ENSUMUG00000043003	pseudogene	Chr9:76507281-76508000 (+)
LP/J	ENSMUSG00230025795	pseudogene	Chr9:76733182-76733913 (+)
NOD/ShiLtJ	ENSMUSG00190038689	pseudogene	Chr9:76703858-76704581 (+)
NZO/HlLtJ	ENSMUSG00225025621	pseudogene	Chr9:76925708-76926431 (+)
PWK/PhJ	ENSLUMG00010016481	pseudogene	Chr9:76464124-76464837 (+)
SPRET/EiJ	ENSMSPG00010004373	pseudogene	Chr9:77754863-77755600 (+)
WSB/EiJ	ENSIUOG00005026615	pseudogene	Chr9:76067664-76068395 (+)

Homology

• Gene Tree
  Gm8125
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm8125
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000111207 (Evidence)
• NCBI Gene
  666479

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111207	Ensembl Gene Model | MGI Sequence Detail	738	C57BL/6J
transcript	ENSMUST00000216602	Ensembl | MGI Sequence Detail	738	Not Applicable

References

• Summaries
  All 11

  Phenotypes 7
• Earliest
  J:12013 Russell LB, Definition of functional units in a small chromosomal segment of the mouse and its use in interpreting the nature of radiation-induced mutations. Mutat Res. 1971 Jan;11(1):107-23
• Latest
  J:29898 Avraham KB, et al., The mouse Snell's waltzer deafness gene encodes an unconventional myosin required for structural integrity of inner ear hair cells. Nat Genet. 1995 Dec;11(4):369-75