Gm8047 Pseudogene Detail

Summary

• Symbol
  Gm8047
• Name
  predicted gene 8047

• Feature Type
  pseudogene
• IDs
  MGI:3648510
  NCBI Gene: 102631995
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:6064442-6065301 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 2.07 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  194 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648510	pseudogene	Chr15:6064309-6065616 (+)
129S1/SvImJ	ENSMUSG00200034393	pseudogene	Chr15:3039542-3040401 (+)
A/J	ENSMUSG00195010899	pseudogene	Chr15:2956901-2957760 (+)
AKR/J	ENSMUSG00220022979	pseudogene	Chr15:2840210-2841069 (+)
BALB/cJ	ENSMUSG00180035374	pseudogene	Chr15:2934025-2934884 (+)
C3H/HeJ	ENSMUSG00175033742	pseudogene	Chr15:3099451-3100310 (+)
C57BL/6NJ	ENSMUSG00215028220	pseudogene	Chr15:2947333-2948192 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025747	pseudogene	Chr15:3033776-3034635 (+)
CBA/J	ENSMUSG00210025943	pseudogene	Chr15:3084414-3085273 (+)
DBA/2J	ENSMUSG00185033830	pseudogene	Chr15:3032258-3033117 (+)
FVB/NJ	ENSMUSG00205028791	pseudogene	Chr15:2959776-2960635 (+)
JF1/MsJ	ENSUMUG00000036068	pseudogene	Chr15:3068273-3069132 (+)
LP/J	ENSMUSG00230020052	pseudogene	Chr15:6532802-6533661 (+)
NOD/ShiLtJ	ENSMUSG00190009985	pseudogene	Chr15:3026790-3027649 (+)
NZO/HlLtJ	ENSMUSG00225035006	pseudogene	Chr15:6778059-6778918 (+)
PWK/PhJ	ENSLUMG00010037683	pseudogene	Chr15:3110393-3111252 (+)
SPRET/EiJ	ENSMSPG00010035118	pseudogene	Chr15:3126828-3127685 (+)
WSB/EiJ	ENSIUOG00005031198	pseudogene	Chr15:2942350-2943209 (+)

Homology

• Gene Tree
  Gm8047
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000115093 (Evidence)
• NCBI Gene
  102631995

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115093	Ensembl Gene Model | MGI Sequence Detail	860	C57BL/6J
transcript	ENSMUST00000227373	Ensembl | MGI Sequence Detail	860	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;