Gm8049 Pseudogene Detail

Summary

• Symbol
  Gm8049
• Name
  predicted gene 8049

• Feature Type
  pseudogene
• IDs
  MGI:3648503
  NCBI Gene: 666327
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:25361758-25363539 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 10.25 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  182 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648503	pseudogene	Chr9:25361707-25363539 (+)
129S1/SvImJ	ENSMUSG00200008202	pseudogene	Chr9:22344888-22346669 (+)
A/J	ENSMUSG00195006346	pseudogene	Chr9:22157020-22158801 (+)
AKR/J	ENSMUSG00220010505	pseudogene	Chr9:22155585-22157366 (+)
BALB/cJ	ENSMUSG00180007070	pseudogene	Chr9:22291205-22292986 (+)
C3H/HeJ	ENSMUSG00175019811	pseudogene	Chr9:22267674-22269455 (+)
C57BL/6NJ	ENSMUSG00215008792	pseudogene	Chr9:22253038-22254819 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019456	pseudogene	Chr9:22270894-22272674 (+)
CBA/J	ENSMUSG00210022225	pseudogene	Chr9:22306385-22308166 (+)
DBA/2J	ENSMUSG00185002583	pseudogene	Chr9:22349785-22351566 (+)
FVB/NJ	ENSMUSG00205004705	pseudogene	Chr9:22626690-22628471 (+)
JF1/MsJ	ENSUMUG00000016313	pseudogene	Chr9:22455908-22457697 (+)
LP/J	ENSMUSG00230005359	pseudogene	Chr9:22749609-22751390 (+)
NOD/ShiLtJ	ENSMUSG00190006524	pseudogene	Chr9:22324083-22325864 (+)
NZO/HlLtJ	ENSMUSG00225015048	pseudogene	Chr9:22753726-22755507 (+)
PWK/PhJ	ENSLUMG00010009797	pseudogene	Chr9:22340166-22341951 (+)
SPRET/EiJ	ENSMSPG00010002194	pseudogene	Chr9:22636360-22637692 (+)
WSB/EiJ	ENSIUOG00005016192	pseudogene	Chr9:21819349-21821130 (+)

Homology

• Gene Tree
  Gm8049
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000111600 (Evidence)
• NCBI Gene
  666327

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111600	Ensembl Gene Model | MGI Sequence Detail	1782	C57BL/6J
transcript	ENSMUST00000214336	Ensembl | MGI Sequence Detail	1782	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14