Gm6070 Pseudogene Detail

Summary

• Symbol
  Gm6070
• Name
  predicted gene 6070

• Feature Type
  pseudogene
• IDs
  MGI:3648421
  NCBI Gene: 606543
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:4515589-4516007 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 2.04 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  79 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648421	pseudogene	Chr8:4515542-4516208 (+)
129S1/SvImJ	ENSMUSG00200012703	pseudogene	Chr8:1349090-1349509 (+)
A/J	ENSMUSG00195011561	pseudogene	Chr8:1745221-1745639 (+)
AKR/J	ENSMUSG00220011113	pseudogene	Chr8:1465606-1466024 (+)
BALB/cJ	ENSMUSG00180005176	pseudogene	Chr8:1392871-1393289 (+)
C3H/HeJ	ENSMUSG00175008628	pseudogene	Chr8:1505991-1506409 (+)
C57BL/6NJ	ENSMUSG00215008958	pseudogene	Chr8:1425015-1425433 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020874	pseudogene	Chr8:1435458-1435830 (+)
CBA/J	ENSMUSG00210010940	pseudogene	Chr8:1384771-1385189 (+)
DBA/2J	ENSMUSG00185004318	pseudogene	Chr8:1519571-1519989 (+)
FVB/NJ	ENSMUSG00205005590	pseudogene	Chr8:1447742-1448160 (+)
JF1/MsJ	ENSUMUG00000047972	pseudogene	Chr8:1486189-1486608 (+)
LP/J	ENSMUSG00230007886	pseudogene	Chr8:3689103-3689521 (+)
NOD/ShiLtJ	ENSMUSG00190012209	pseudogene	Chr8:1493611-1494029 (+)
NZO/HlLtJ	ENSMUSG00225019682	pseudogene	Chr8:11545118-11545536 (+)
PWK/PhJ	ENSLUMG00010010965	pseudogene	Chr8:1408319-1408738 (+)
SPRET/EiJ	ENSMSPG00010018903	pseudogene	Chr8:1330695-1331113 (+)
WSB/EiJ	ENSIUOG00005004988	pseudogene	Chr8:1432532-1432950 (+)

Homology

• Gene Tree
  Gm6070
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000108860 (Evidence)
• NCBI Gene
  606543

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108860	Ensembl Gene Model | MGI Sequence Detail	419	C57BL/6J
transcript	ENSMUST00000207275	Ensembl | MGI Sequence Detail	419	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;