Gm16481 Pseudogene Detail

Summary

• Symbol
  Gm16481
• Name
  predicted gene 16481

• Feature Type
  pseudogene
• IDs
  MGI:3648374
  NCBI Gene: 675380
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:13104566-13105789 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 8.13 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648374	pseudogene	ChrX:13104566-13105792 (+)
129S1/SvImJ	ENSMUSG00200034888	pseudogene	ChrX:7828804-7830030 (+)
A/J	ENSMUSG00195042570	pseudogene	ChrX:7821293-7822519 (+)
AKR/J	ENSMUSG00220036633	pseudogene	ChrX:7336991-7338217 (+)
BALB/cJ	ENSMUSG00180030604	pseudogene	ChrX:7820729-7821955 (+)
C3H/HeJ	ENSMUSG00175034456	pseudogene	ChrX:7845888-7847114 (+)
C57BL/6NJ	ENSMUSG00215042050	pseudogene	ChrX:8483892-8485118 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012530	pseudogene	ChrX:7076928-7078159 (+)
CAST/EiJ	ENSTCUG00005034020	pseudogene	ChrX:7799287-7800510 (+)
CBA/J	ENSMUSG00210039548	pseudogene	ChrX:7885066-7886292 (+)
DBA/2J	ENSMUSG00185036693	pseudogene	ChrX:14484408-14485634 (+)
FVB/NJ	ENSMUSG00205034872	pseudogene	ChrX:7568678-7569904 (+)
JF1/MsJ	ENSUMUG00000042446	pseudogene	ChrX:28320348-28321574 (+)
LP/J	ENSMUSG00230032573	pseudogene	ChrX:19057418-19058644 (+)
NOD/ShiLtJ	ENSMUSG00190041849	pseudogene	ChrX:7844335-7845561 (+)
NZO/HlLtJ	ENSMUSG00225033962	pseudogene	ChrX:24291773-24292999 (+)
PWK/PhJ	ENSLUMG00010036964	pseudogene	ChrX:7708226-7709452 (+)
SPRET/EiJ	ENSMSPG00010026217	pseudogene	ChrX:8678994-8680216 (+)
WSB/EiJ	ENSIUOG00005016663	pseudogene	ChrX:4508281-4509507 (+)

Homology

• Gene Tree
  Gm16481
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000082090 (Evidence)
• NCBI Gene
  675380

Representative Sequences			Length	Strain/Species
genomic	675380	NCBI Gene Model | MGI Sequence Detail	1224	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14