Gm7887 Pseudogene Detail

Summary

• Symbol
  Gm7887
• Name
  predicted gene 7887

• Feature Type
  pseudogene
• IDs
  MGI:3648251
  NCBI Gene: 666005
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:48501488-48502024 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 23.50 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648251	pseudogene	Chr6:48500856-48502064 (-)
129S1/SvImJ	ENSMUSG00200023314	pseudogene	Chr17:87368418-87368954 (-)
129S1/SvImJ	ENSMUSG00200005917	pseudogene	Chr6:45407102-45407638 (-)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215011254	pseudogene	Chr6:45452148-45452684 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000013669	pseudogene	Chr6:45241917-45242453 (-)
LP/J	ENSMUSG00230020313	pseudogene	Chr6:46904229-46904765 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225029527	pseudogene	Chr17:93645202-93645738 (-)
NZO/HlLtJ	ENSMUSG00225019738	pseudogene	Chr6:48940755-48941291 (-)
PWK/PhJ	ENSLUMG00010022738	pseudogene	Chr6:44876361-44876897 (-)
PWK/PhJ	ENSLUMG00010034541	pseudogene	Chr17:87345273-87345809 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005023590	pseudogene	Chr17:88379495-88380031 (-)
WSB/EiJ	ENSIUOG00005028540	pseudogene	Chr6:45515067-45515603 (-)

Homology

• Gene Tree
  Gm7887
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000044211 (Evidence)
• NCBI Gene
  666005

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000044211	Ensembl Gene Model | MGI Sequence Detail	537	C57BL/6J
transcript	ENSMUST00000056948	Ensembl | MGI Sequence Detail	537	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;