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Gm5546 Gene Detail
Summary
  • Symbol
    Gm5546
  • Name
    predicted gene 5546
Location &
Maps
more
  • Sequence Map
    Chr3:104258782-104267634 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 45.57 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    235 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3648205
 lncRNA gene Chr3:104257951-104273930 (-)
129S1/SvImJ ENSMUSG00200045457
 lncRNA gene Chr3:100871290-100887255 (-)
A/J ENSMUSG00195025432
 lncRNA gene Chr3:101293465-101309443 (-)
AKR/J ENSMUSG00220042462
 lncRNA gene Chr3:99649331-99665316 (-)
BALB/cJ ENSMUSG00180020103
 lncRNA gene Chr3:101217579-101233554 (-)
C3H/HeJ ENSMUSG00175033041
 lncRNA gene Chr3:100775753-100791731 (-)
C57BL/6NJ ENSMUSG00215033780
 lncRNA gene Chr3:101528087-101544064 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005697
 lincRNA gene Chr3:98419125-98434838 (-)
CAST/EiJ ENSTCUG00005021500
 lncRNA gene Chr3:101500771-101516743 (-)
CBA/J ENSMUSG00210009043
 lncRNA gene Chr3:101397777-101413755 (-)
DBA/2J ENSMUSG00185022377
 lncRNA gene Chr3:101864243-101880221 (-)
FVB/NJ ENSMUSG00205032998
 lncRNA gene Chr3:100456823-100472810 (-)
JF1/MsJ ENSUMUG00000052720
 lncRNA gene Chr3:100616265-100632346 (-)
LP/J ENSMUSG00230020626
 lncRNA gene Chr3:103799585-103815550 (-)
NOD/ShiLtJ ENSMUSG00190036610
 lncRNA gene Chr3:102069551-102085524 (-)
NZO/HlLtJ ENSMUSG00225020204
 lncRNA gene Chr3:106271272-106287251 (-)
PWK/PhJ ENSLUMG00010029911
 lncRNA gene Chr3:100700585-100716196 (-)
SPRET/EiJ ENSMSPG00010047220
 lncRNA gene Chr3:100883447-100899761 (-)
WSB/EiJ ENSIUOG00005004586
 lncRNA gene Chr3:101420806-101436405 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    610
  • Tissues
    3
  • cDNA Data
    3
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    34
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 433634 NCBI Gene Model | MGI Sequence Detail 8853 C57BL/6J ±  kb
transcript AK044520 GenBank | ENA | DDBJ | MGI Sequence Detail 2783 C57BL/6J  
polypeptide Q8C8T4 UniProt | EBI | MGI Sequence Detail 100 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 16
    Developmental Gene Expression 1
    Diseases 1
    Phenotypes 6
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory