Gm8609 Pseudogene Detail

Summary

• Symbol
  Gm8609
• Name
  predicted gene 8609

• Feature Type
  pseudogene
• IDs
  MGI:3648173
  NCBI Gene: 667400
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:39754364-39755361 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 27.48 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  9 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648173	pseudogene	Chr16:39754347-39755566 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011279	pseudogene	Chr16:38520461-38521458 (+)
A/J	MGP_AJ_G0011266	pseudogene	Chr16:36621536-36622533 (+)
AKR/J	MGP_AKRJ_G0011228	pseudogene	Chr16:38010574-38011571 (+)
BALB/cJ	MGP_BALBcJ_G0011235	pseudogene	Chr16:36732787-36733784 (+)
C3H/HeJ	MGP_C3HHeJ_G0011132	pseudogene	Chr16:38110607-38111604 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011527	pseudogene	Chr16:39407311-39408308 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010115	pseudogene	Chr16:36948988-36949975 (+)
CAST/EiJ	MGP_CASTEiJ_G0010959	pseudogene	Chr16:38275046-38276043 (+)
CBA/J	MGP_CBAJ_G0011112	pseudogene	Chr16:41123981-41124978 (+)
DBA/2J	MGP_DBA2J_G0011160	pseudogene	Chr16:36486962-36487959 (+)
FVB/NJ	MGP_FVBNJ_G0011161	pseudogene	Chr16:36490294-36491291 (+)
LP/J	MGP_LPJ_G0011254	pseudogene	Chr16:38154993-38155990 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011154	pseudogene	Chr16:40290045-40291042 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011508	pseudogene	Chr16:37950305-37951302 (+)
PWK/PhJ	MGP_PWKPhJ_G0010830	pseudogene	Chr16:36902052-36903049 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010658	pseudogene	Chr16:37846345-37847341 (+)
WSB/EiJ	MGP_WSBEiJ_G0011001	pseudogene	Chr16:38035462-38036459 (+)

Homology

• Gene Tree
  Gm8609
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000098070 (Evidence)
• NCBI Gene
  667400

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098070	Ensembl Gene Model | MGI Sequence Detail	998	C57BL/6J
transcript	ENSMUST00000182967	Ensembl | MGI Sequence Detail	998	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;