Cyp2b26-ps Pseudogene Detail

Summary

• Symbol
  Cyp2b26-ps
• Name
  cytochrome P450, family 2, subfamily b, polypeptide 26, pseudogene
• Synonyms
  EG623532

• Feature Type
  pseudogene
• IDs
  MGI:3648075
  NCBI Gene: 100503967
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:25834178-25848017 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 14.11 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  13 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648075	pseudogene	Chr7:25834171-25848017 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0040540	pseudogene	Chr7:23892707-23907383 (-)
AKR/J	MGP_AKRJ_G0040465	pseudogene	Chr7:24522984-24546804 (-)
BALB/cJ	MGP_BALBcJ_G0040535	pseudogene	Chr7:24138033-24151896 (-)
C3H/HeJ	MGP_C3HHeJ_G0040167	pseudogene	Chr7:24930846-24944949 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0041177	pseudogene	Chr7:25383853-25397712 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0040135	pseudogene	Chr7:26285597-26299377 (-)
DBA/2J	MGP_DBA2J_G0040338	pseudogene	Chr7:23799946-23814193 (-)
FVB/NJ	MGP_FVBNJ_G0040282	pseudogene	Chr7:23830355-23844403 (-)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0040275	pseudogene	Chr7:26147214-26162133 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041245	pseudogene	Chr7:24163183-24176919 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Cyp2b26-ps
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Cyp2b26-ps
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15
• RefSeq
  1

• Ensembl
  ENSMUSG00000108544 (Evidence)
• NCBI Gene
  100503967

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108544	Ensembl Gene Model | MGI Sequence Detail	13840	C57BL/6J
transcript	ENSMUST00000206238	Ensembl | MGI Sequence Detail	1090	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:87417 Nelson DR, et al., Comparison of cytochrome P450 (CYP) genes from the mouse and human genomes, including nomenclature recommendations for genes, pseudogenes and alternative-splice variants. Pharmacogenetics. 2004 Jan;14(1):1-18
• Latest
  J:345867 Li L, et al., Impact of nicotine metabolism on nicotine's pharmacological effects and behavioral responses: insights from a Cyp2a(4/5)bgs-null mouse. J Pharmacol Exp Ther. 2013 Dec;347(3):746-54