Gm5063 Pseudogene Detail

Summary

• Symbol
  Gm5063
• Name
  predicted gene 5063

• Feature Type
  pseudogene
• IDs
  MGI:3648069
  NCBI Gene: 271374
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:44621037-44622012 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 29.11 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  226 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648069	pseudogene	Chr16:44620562-44622118 (-)
129S1/SvImJ	ENSMUSG00200021662	pseudogene	Chr16:41527096-41528071 (-)
A/J	ENSMUSG00195003604	pseudogene	Chr16:41112209-41113184 (-)
AKR/J	ENSMUSG00220022819	pseudogene	Chr16:41449073-41450042 (-)
BALB/cJ	ENSMUSG00180029482	pseudogene	Chr16:41318650-41319625 (-)
C3H/HeJ	ENSMUSG00175026087	pseudogene	Chr16:41589198-41590173 (-)
C57BL/6NJ	ENSMUSG00215008475	pseudogene	Chr16:41401885-41402860 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012876	pseudogene	Chr16:41824943-41825919 (-)
CBA/J	ENSMUSG00210016939	pseudogene	Chr16:41611909-41612884 (-)
DBA/2J	ENSMUSG00185011219	pseudogene	Chr16:41498368-41499343 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000030566	pseudogene	Chr16:41714757-41715732 (-)
LP/J	ENSMUSG00230029727	pseudogene	Chr16:44081076-44082051 (-)
NOD/ShiLtJ	ENSMUSG00190019331	pseudogene	Chr16:41613788-41614757 (-)
NZO/HlLtJ	ENSMUSG00225028921	pseudogene	Chr16:47172749-47173724 (-)
PWK/PhJ	ENSLUMG00010028405	pseudogene	Chr16:41598378-41599354 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005013634	pseudogene	Chr16:41742598-41743252 (-)

Homology

• Gene Tree
  Gm5063
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000116827 (Evidence)
• NCBI Gene
  271374

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116827	Ensembl Gene Model | MGI Sequence Detail	976	C57BL/6J
transcript	ENSMUST00000232126	Ensembl | MGI Sequence Detail	976	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;