Gm5874 Pseudogene Detail

Summary

• Symbol
  Gm5874
• Name
  predicted gene 5874

• Feature Type
  pseudogene
• IDs
  MGI:3648027
  NCBI Gene: 545829
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:18824551-18825058 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 8.16 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  145 from dbSNP Build 142
• Strain Annotations
  20

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648027	pseudogene	Chr6:18824513-18825577 (+)
129S1/SvImJ	ENSMUSG00200020147	pseudogene	Chr6:15866309-15866816 (+)
A/J	ENSMUSG00195013242	pseudogene	Chr6:15832022-15832529 (+)
AKR/J	ENSMUSG00220001066	pseudogene	Chr6:15405954-15406461 (+)
BALB/cJ	ENSMUSG00180001318	pseudogene	Chr6:15977581-15978088 (+)
C3H/HeJ	ENSMUSG00175016919	pseudogene	Chr6:15763680-15764187 (+)
C57BL/6NJ	ENSMUSG00215013202	pseudogene	Chr6:15879115-15879622 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009310	pseudogene	Chr1:143122159-143136429 (-)
CAST/EiJ	ENSTCUG00005022244	pseudogene	Chr6:15585867-15586374 (+)
CBA/J	ENSMUSG00210007052	pseudogene	Chr6:15796712-15797219 (+)
DBA/2J	ENSMUSG00185026385	pseudogene	Chr6:15928639-15929146 (+)
FVB/NJ	ENSMUSG00205008126	pseudogene	Chr6:15839743-15840250 (+)
JF1/MsJ	ENSUMUG00000001596	pseudogene	Chr6:15681094-15681601 (+)
LP/J	ENSMUSG00230018986	pseudogene	Chr1:153065823-153081305 (-)
LP/J	ENSMUSG00230003604	pseudogene	Chr6:16885335-16885842 (+)
NOD/ShiLtJ	ENSMUSG00190010652	pseudogene	Chr6:15650909-15651416 (+)
NZO/HlLtJ	ENSMUSG00225006640	pseudogene	Chr1:156751366-156766848 (-)
NZO/HlLtJ	ENSMUSG00225006428	pseudogene	Chr6:18801949-18802456 (+)
PWK/PhJ	ENSLUMG00010020326	pseudogene	Chr6:15398746-15399253 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005003790	pseudogene	Chr6:15874698-15875205 (+)

Homology

• Gene Tree
  Gm5874
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000071568 (Evidence)
• NCBI Gene
  545829

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000071568	Ensembl Gene Model | MGI Sequence Detail	508	C57BL/6J
transcript	ENSMUST00000096101	Ensembl | MGI Sequence Detail	508	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;