Gm4814 Gene Detail

Summary

• Symbol
  Gm4814
• Name
  predicted gene 4814

• Feature Type
  lncRNA gene
• IDs
  MGI:3647983
  NCBI Gene: 100502942
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:93209812-93211263 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 47.81 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647983	lncRNA gene	Chr13:93209812-93211265 (+)
129S1/SvImJ	ENSMUSG00200009323	lncRNA gene	Chr13:87712898-87714347 (+)
A/J	ENSMUSG00195024506	lncRNA gene	Chr13:88207705-88209155 (+)
AKR/J	ENSMUSG00220013881	lncRNA gene	Chr13:86693579-86695028 (+)
BALB/cJ	ENSMUSG00180015995	lncRNA gene	Chr13:88749197-88750646 (+)
C3H/HeJ	ENSMUSG00175023531	lncRNA gene	Chr13:88913112-88914561 (+)
C57BL/6NJ	ENSMUSG00215002991	lncRNA gene	Chr13:88807415-88808868 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009646	lncRNA gene	Chr13:88004981-88006428 (+)
CBA/J	ENSMUSG00210024851	lncRNA gene	Chr13:88235451-88236900 (+)
CBA/J	ENSMUSG00210024595	lncRNA gene	Chr13:88209498-88210947 (+)
DBA/2J	ENSMUSG00185019604	lncRNA gene	Chr13:91895552-91897001 (+)
FVB/NJ	ENSMUSG00205008529	lncRNA gene	Chr13:87705087-87706536 (+)
JF1/MsJ	ENSUMUG00000024858	lncRNA gene	Chr13:91596339-91597787 (+)
LP/J	ENSMUSG00230038139	lncRNA gene	Chr13:101913622-101915071 (+)
NOD/ShiLtJ	ENSMUSG00190018956	lncRNA gene	Chr13:88589876-88591329 (+)
NZO/HlLtJ	ENSMUSG00225034448	lncRNA gene	Chr13:94427260-94428709 (+)
PWK/PhJ	ENSLUMG00010011729	lncRNA gene	Chr13:87701548-87702995 (+)
SPRET/EiJ	ENSMSPG00010006772	lncRNA gene	Chr13:88946138-88947574 (+)
WSB/EiJ	ENSIUOG00005031297	lncRNA gene	Chr13:87617051-87618502 (+)

Homology

• Gene Tree
  Gm4814
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm4814
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000114382 (Evidence)
• NCBI Gene
  100502942

Representative Sequences			Length	Strain/Species
genomic	100502942	NCBI Gene Model | MGI Sequence Detail	1452	C57BL/6J
transcript	NR_036451	RefSeq | MGI Sequence Detail	907	C57BL/6
polypeptide	Q8C7C8	UniProt | EBI | MGI Sequence Detail	119	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 4

  cDNA 4

  
  

  Microarray probesets 2

References

• Summaries
  All 15

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582