Gm7089 Pseudogene Detail

Summary

• Symbol
  Gm7089
• Name
  predicted gene 7089

• Feature Type
  pseudogene
• IDs
  MGI:3647982
  NCBI Gene: 632498
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:3360805-3362270 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 8.42 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647982	pseudogene	Chr14:3360805-3362280 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195030557	pseudogene	Chr14:857906-859371 (+)
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215021845	pseudogene	Chr14:393748-395213 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031329	pseudogene	Chr14:155240-156705 (+)
CBA/J	ENSMUSG00210036055	pseudogene	Chr14:383608-385073 (+)
DBA/2J	ENSMUSG00185037273	pseudogene	Chr14:388968-390433 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000026339	pseudogene	Chr14:391677-393142 (+)
LP/J	ENSMUSG00230006936	pseudogene	Chr14:1518624-1520089 (+)
NOD/ShiLtJ	ENSMUSG00190033611	pseudogene	Chr14:378857-380322 (+)
NZO/HlLtJ	ENSMUSG00225037204	pseudogene	Chr14:813910-815375 (+)
PWK/PhJ	ENSLUMG00010033791	pseudogene	Chr14:21683433-21684898 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005025123	pseudogene	Chr14:212806-214271 (+)

Homology

• Gene Tree
  Gm7089
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000114445 (Evidence)
• NCBI Gene
  632498

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114445	Ensembl Gene Model | MGI Sequence Detail	1466	C57BL/6J
transcript	ENSMUST00000225256	Ensembl | MGI Sequence Detail	1466	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;