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Clec2j Gene Detail
Summary
  • Symbol
    Clec2j
  • Name
    C-type lectin domain family 2, member J
Location &
Maps
more
  • Sequence Map
    Chr6:128631869-128633990 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 63.07 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    233 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647940
 protein coding gene Chr6:128629379-128633995 (-)
129S1/SvImJ ENSMUSG00200048283
 pseudogene Chr6:125711662-125721057 (-)
A/J ENSMUSG00195031766
 pseudogene Chr6:125131319-125140714 (-)
AKR/J ENSMUSG00220041336
 pseudogene Chr6:123992940-124002335 (-)
BALB/cJ ENSMUSG00180038768
 pseudogene Chr6:125468321-125477716 (-)
C3H/HeJ ENSMUSG00175043501
 pseudogene Chr6:125137241-125146636 (-)
C57BL/6NJ ENSMUSG00215028553
 pseudogene Chr6:125459626-125469030 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028922
 pseudogene Chr6:124541924-125171675 (-)
CAST/EiJ ENSTCUG00005043517
 pseudogene Chr6:125315345-125323730 (-)
CBA/J ENSMUSG00210017221
 pseudogene Chr6:125168400-125177795 (-)
DBA/2J ENSMUSG00185047023
 pseudogene Chr6:125869143-125878538 (-)
FVB/NJ ENSMUSG00205037311
 pseudogene Chr6:124740695-124750124 (-)
JF1/MsJ ENSUMUG00000042740
 pseudogene Chr6:124290145-124297872 (-)
LP/J ENSMUSG00230045866
 pseudogene Chr6:127065804-127075199 (-)
NOD/ShiLtJ ENSMUSG00190041973
 pseudogene Chr6:124855745-124865401 (-)
NZO/HlLtJ ENSMUSG00225018481
 pseudogene Chr6:129096341-129105758 (-)
PWK/PhJ ENSLUMG00010043413
 pseudogene Chr6:123545272-123553022 (-)
SPRET/EiJ ENSMSPG00010042758
 pseudogene Chr6:126402863-126414602 (-)
WSB/EiJ ENSIUOG00005047827
 pseudogene Chr6:125565800-125575227 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 677440 NCBI Gene Model | MGI Sequence Detail 2122 C57BL/6J ±  kb
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 7
  • Earliest
    J:108757 Carlyle JR, et al., Molecular and genetic basis for strain-dependent NK1.1 alloreactivity of mouse NK cells. J Immunol. 2006 Jun 15;176(12):7511-7524
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory