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Gm5648 Pseudogene Detail
Summary
  • Symbol
    Gm5648
  • Name
    predicted pseudogene 5648
Location &
Maps
more
  • Sequence Map
    ChrX:120244688-120246271 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 49.58 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    155 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647868
 pseudogene ChrX:120244685-120246271 (-)
129S1/SvImJ ENSMUSG00200011533
 pseudogene ChrX:102081959-102083545 (-)
A/J ENSMUSG00195020874
 pseudogene ChrX:105694228-105695817 (-)
AKR/J ENSMUSG00220013592
 pseudogene ChrX:100086284-100087870 (-)
BALB/cJ ENSMUSG00180019696
 pseudogene ChrX:102326502-102328091 (-)
C3H/HeJ ENSMUSG00175021795
 pseudogene ChrX:105971337-105972926 (-)
C57BL/6NJ ENSMUSG00215002710
 pseudogene ChrX:102709287-102710873 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005008059
 pseudogene ChrX:103376062-103377648 (-)
CBA/J ENSMUSG00210020779
 pseudogene ChrX:102804314-102805903 (-)
DBA/2J ENSMUSG00185024099
 pseudogene ChrX:115405886-115407472 (-)
FVB/NJ ENSMUSG00205021086
 pseudogene ChrX:101928601-101930187 (-)
JF1/MsJ ENSUMUG00000011429
 pseudogene ChrX:135922878-135924467 (-)
LP/J ENSMUSG00230004036
 pseudogene ChrX:122033251-122034837 (-)
NOD/ShiLtJ ENSMUSG00190014929
 pseudogene ChrX:102151258-102152844 (-)
NZO/HlLtJ ENSMUSG00225033913
 pseudogene ChrX:127206609-127208195 (-)
PWK/PhJ ENSLUMG00010026940
 pseudogene ChrX:101170497-101172086 (-)
SPRET/EiJ no annotation
WSB/EiJ ENSIUOG00005005094
 pseudogene ChrX:102511423-102513009 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    834
  • Tissues
    30
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 434907 NCBI Gene Model | MGI Sequence Detail 1584 C57BL/6J ±  kb
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 6
    Developmental Gene Expression 1
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory