About   Help   FAQ
Pate12 Gene Detail
Summary
  • Symbol
    Pate12
  • Name
    prostate and testis expressed 12
  • Synonyms
    Gm7257
  • Feature Type
    protein coding gene
  • IDs
    MGI:3647831
    NCBI Gene: 639025
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:36343180-36346234 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 20.63 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    176 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647831
 protein coding gene Chr9:36343125-36346234 (+)
129S1/SvImJ ENSMUSG00200039756
 protein coding gene Chr9:33320727-33323780 (+)
A/J ENSMUSG00195049075
 protein coding gene Chr9:33112078-33115131 (+)
AKR/J ENSMUSG00220042665
 protein coding gene Chr9:33194170-33197223 (+)
BALB/cJ ENSMUSG00180044170
 protein coding gene Chr9:33240420-33243473 (+)
C3H/HeJ ENSMUSG00175045944
 protein coding gene Chr9:33241524-33244577 (+)
C57BL/6NJ ENSMUSG00215032466
 protein coding gene Chr9:33242846-33245900 (+)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005042833
 protein coding gene Chr9:33211923-33214980 (+)
CBA/J ENSMUSG00210035692
 protein coding gene Chr9:33251985-33255040 (+)
DBA/2J ENSMUSG00185036938
 protein coding gene Chr9:33343600-33346653 (+)
FVB/NJ ENSMUSG00205034546
 protein coding gene Chr9:33607213-33610266 (+)
JF1/MsJ ENSUMUG00000025680
 protein coding gene Chr9:33476113-33479170 (+)
LP/J ENSMUSG00230033086
 protein coding gene Chr9:33738698-33741750 (+)
NOD/ShiLtJ ENSMUSG00190021217
 protein coding gene Chr9:33375690-33378743 (+)
NZO/HlLtJ ENSMUSG00225017726
 protein coding gene Chr9:33706783-33709835 (+)
PWK/PhJ ENSLUMG00010042541
 protein coding gene Chr9:33387206-33390260 (+)
SPRET/EiJ ENSMSPG00010032904
 protein coding gene Chr9:33957009-33960502 (+)
WSB/EiJ ENSIUOG00005037050
 protein coding gene Chr9:32863800-32866854 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000023093 Ensembl Gene Model | MGI Sequence Detail 3055 C57BL/6J ±  kb
transcript ENSMUST00000041537 Ensembl | MGI Sequence Detail 519 Not Applicable  
polypeptide ENSMUSP00000048154 Ensembl | MGI Sequence Detail 99 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR016054 Ly-6 antigen/uPA receptor-like
Molecular
Reagents
less

  • Microarray probesets 1
Other
Accession IDs
less
MGI:6278532
References
more
  • Summaries
    All 12
    Phenotypes 1
  • Earliest
    J:138601 Levitin F, et al., PATE gene clusters code for multiple, secreted TFP/Ly-6/uPAR proteins that are expressed in reproductive and neuron-rich tissues and possess neuromodulatory activity. J Biol Chem. 2008 Jun 13;283(24):16928-39
  • Latest
    J:279308 Fujihara Y, et al., Identification of multiple male reproductive tract-specific proteins that regulate sperm migration through the oviduct in mice. Proc Natl Acad Sci U S A. 2019 Sep 10;116(37):18498-18506
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory