Gm6353 Pseudogene Detail

Summary

• Symbol
  Gm6353
• Name
  predicted gene 6353

• Feature Type
  pseudogene
• IDs
  MGI:3647819
  NCBI Gene: 622746
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:62412109-62413098 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 26.67 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  174 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647819	pseudogene	Chr12:62412041-62413098 (+)
129S1/SvImJ	ENSMUSG00200004489	pseudogene	Chr12:54350428-54351478 (+)
A/J	ENSMUSG00195001753	pseudogene	Chr12:57021603-57022653 (+)
AKR/J	ENSMUSG00220015802	pseudogene	Chr12:54994954-54996004 (+)
BALB/cJ	ENSMUSG00180007664	pseudogene	Chr12:56036124-56037174 (+)
C3H/HeJ	ENSMUSG00175016816	pseudogene	Chr12:59089564-59090614 (+)
C57BL/6NJ	ENSMUSG00215010461	pseudogene	Chr12:55309168-55310218 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012499	pseudogene	Chr12:55393865-55394921 (+)
CBA/J	ENSMUSG00210014225	pseudogene	Chr12:55569222-55570272 (+)
DBA/2J	ENSMUSG00185001691	pseudogene	Chr12:57511224-57512274 (+)
FVB/NJ	ENSMUSG00205005777	pseudogene	Chr12:55278398-55279448 (+)
JF1/MsJ	ENSUMUG00000031461	pseudogene	Chr12:61481446-61482502 (+)
LP/J	ENSMUSG00230012170	pseudogene	Chr12:64504675-64505725 (+)
NOD/ShiLtJ	ENSMUSG00190007286	pseudogene	Chr12:54594949-54595999 (+)
NZO/HlLtJ	ENSMUSG00225029843	pseudogene	Chr12:66560971-66562021 (+)
PWK/PhJ	ENSLUMG00010002632	pseudogene	Chr12:55504534-55505590 (+)
SPRET/EiJ	ENSMSPG00010011067	pseudogene	Chr12:57084742-57085799 (+)
WSB/EiJ	ENSIUOG00005001127	pseudogene	Chr12:55236678-55237734 (+)

Homology

• Gene Tree
  Gm6353
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm6353
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000113071 (Evidence)
• NCBI Gene
  622746

Representative Sequences			Length	Strain/Species
genomic	622746	NCBI Gene Model | MGI Sequence Detail	990	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;