Gm6994 Gene Detail

Summary

• Symbol
  Gm6994
• Name
  predicted gene 6994

• Feature Type
  lncRNA gene
• IDs
  MGI:3647788
  NCBI Gene: 629678
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:77716923-77744308 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 40.77 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  840 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647788	lncRNA gene	Chr14:77716923-77744308 (-)
129S1/SvImJ	ENSMUSG00200010612	lncRNA gene	Chr14:66159125-66186476 (-)
A/J	ENSMUSG00195004369	lncRNA gene	Chr14:66302153-66329637 (-)
AKR/J	ENSMUSG00220007438	lncRNA gene	Chr14:65683750-65711106 (-)
BALB/cJ	ENSMUSG00180024640	lncRNA gene	Chr14:65893969-65921451 (-)
C3H/HeJ	ENSMUSG00175030901	lncRNA gene	Chr14:67703206-67730562 (-)
C57BL/6NJ	ENSMUSG00215025746	lncRNA gene	Chr14:65882004-65909401 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005060	lincRNA gene	Chr14:68342875-68370808 (-)
CAST/EiJ	ENSTCUG00005033065	lncRNA gene	Chr14:67550141-67577863 (-)
CBA/J	ENSMUSG00210010297	lncRNA gene	Chr14:66320053-66347406 (-)
DBA/2J	ENSMUSG00185009258	lncRNA gene	Chr14:71462094-71489457 (-)
FVB/NJ	ENSMUSG00205025718	lncRNA gene	Chr14:65713746-65741107 (-)
JF1/MsJ	ENSUMUG00000021472	lncRNA gene	Chr14:82619507-82646991 (-)
LP/J	ENSMUSG00230018151	lncRNA gene	Chr14:83496033-83523384 (-)
NOD/ShiLtJ	ENSMUSG00190011078	lncRNA gene	Chr14:66128407-66155763 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010011366	lncRNA gene	Chr14:65496681-65524037 (-)
SPRET/EiJ	ENSMSPG00010028105	lncRNA gene	Chr14:69153148-69180008 (-)
WSB/EiJ	ENSIUOG00005024426	lncRNA gene	Chr14:65475907-65503291 (-)

Homology

• Gene Tree
  Gm6994
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  8
• Chemically induced (other)
  1
• Gene trapped
  3
• Targeted
  4
• Genomic Mutations
  1 involving Gm6994
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  12 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000067973 (Evidence)
• NCBI Gene
  629678

Representative Sequences			Length	Strain/Species
genomic	629678	NCBI Gene Model | MGI Sequence Detail	27386	C57BL/6J
transcript	NR_033141	RefSeq | MGI Sequence Detail	1163	C57BL/6
polypeptide	Q6R5F5	UniProt | EBI | MGI Sequence Detail	143	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 14

  Phenotypes 7
• Earliest
  J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42