Gm8376 Pseudogene Detail

Summary

• Symbol
  Gm8376
• Name
  predicted gene 8376

• Feature Type
  pseudogene
• IDs
  MGI:3647776
  NCBI Gene: 666951
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:5989360-5989921 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 3.58 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647776	pseudogene	Chr17:5989360-5990004 (+)
129S1/SvImJ	ENSMUSG00200034848	pseudogene	Chr17:2874960-2875602 (+)
A/J	ENSMUSG00195024079	pseudogene	Chr17:2879758-2880400 (+)
AKR/J	ENSMUSG00220029200	pseudogene	Chr17:3082543-3083185 (+)
BALB/cJ	ENSMUSG00180028604	pseudogene	Chr17:2891542-2892184 (+)
C3H/HeJ	ENSMUSG00175035931	pseudogene	Chr17:2851528-2852170 (+)
C57BL/6NJ	ENSMUSG00215026881	pseudogene	Chr17:2872370-2873012 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023169	pseudogene	Chr17:2909384-2910026 (+)
CBA/J	ENSMUSG00210039770	pseudogene	Chr17:2868437-2869079 (+)
DBA/2J	ENSMUSG00185023800	pseudogene	Chr17:2971682-2972324 (+)
FVB/NJ	ENSMUSG00205009743	pseudogene	Chr17:2928323-2928965 (+)
JF1/MsJ	ENSUMUG00000038793	pseudogene	Chr17:2942861-2943503 (+)
LP/J	ENSMUSG00230035338	pseudogene	Chr17:4068846-4069488 (+)
NOD/ShiLtJ	ENSMUSG00190035722	pseudogene	Chr17:2864528-2865170 (+)
NZO/HlLtJ	ENSMUSG00225029179	pseudogene	Chr17:6372814-6373456 (+)
PWK/PhJ	ENSLUMG00010019555	pseudogene	Chr17:2959218-2959860 (+)
SPRET/EiJ	ENSMSPG00010040831	pseudogene	Chr17:2895834-2896466 (+)
WSB/EiJ	ENSIUOG00005014496	pseudogene	Chr17:2915947-2916589 (+)

Homology

• Gene Tree
  Gm8376
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000116734 (Evidence)
• NCBI Gene
  666951

Representative Sequences			Length	Strain/Species
genomic	666951	NCBI Gene Model | MGI Sequence Detail	562	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;