Gm6480 Pseudogene Detail

Summary

• Symbol
  Gm6480
• Name
  predicted pseudogene 6480

• Feature Type
  pseudogene
• IDs
  MGI:3647765
  NCBI Gene: 624187
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:46813405-46815056 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 25.41 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647765	pseudogene	ChrX:46813405-46815290 (+)
129S1/SvImJ	ENSMUSG00200038305	pseudogene	ChrX:30827669-30829553 (+)
A/J	ENSMUSG00195017945	pseudogene	ChrX:33438988-33440872 (+)
AKR/J	ENSMUSG00220041476	pseudogene	ChrX:30327391-30329275 (+)
BALB/cJ	ENSMUSG00180035624	pseudogene	ChrX:31168892-31170776 (+)
C3H/HeJ	ENSMUSG00175044463	pseudogene	ChrX:34185437-34187323 (+)
C57BL/6NJ	ENSMUSG00215048179	pseudogene	ChrX:31188001-31189886 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039948	pseudogene	ChrX:33273660-33275546 (+)
CBA/J	ENSMUSG00210043318	pseudogene	ChrX:31438341-31440227 (+)
DBA/2J	ENSMUSG00185034209	pseudogene	ChrX:42144736-42146622 (+)
FVB/NJ	ENSMUSG00205007945	pseudogene	ChrX:30118849-30120733 (+)
JF1/MsJ	ENSUMUG00000033341	pseudogene	ChrX:61214176-61216061 (+)
LP/J	ENSMUSG00230020389	pseudogene	ChrX:48664301-48666185 (+)
NOD/ShiLtJ	ENSMUSG00190039112	pseudogene	ChrX:30604357-30606241 (+)
NZO/HlLtJ	ENSMUSG00225043996	pseudogene	ChrX:53877893-53879779 (+)
PWK/PhJ	ENSLUMG00010041825	pseudogene	ChrX:30932574-30934460 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005048256	pseudogene	ChrX:31722587-31724473 (+)

Homology

• Gene Tree
  Gm6480
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000082894 (Evidence)
• NCBI Gene
  624187

Representative Sequences			Length	Strain/Species
genomic	624187	NCBI Gene Model | MGI Sequence Detail	1652	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;