Gm6162 Pseudogene Detail

Summary

• Symbol
  Gm6162
• Name
  predicted gene 6162

• Feature Type
  pseudogene
• IDs
  MGI:3647648
  NCBI Gene: 620570
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:6229955-6232884 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 1.96 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  253 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647648	pseudogene	Chr3:6229754-6232970 (-)
129S1/SvImJ	ENSMUSG00200000933	pseudogene	Chr3:2909558-2912487 (-)
A/J	ENSMUSG00195001254	pseudogene	Chr3:3231970-3234899 (-)
AKR/J	ENSMUSG00220017261	pseudogene	Chr3:3206358-3209287 (-)
BALB/cJ	ENSMUSG00180007392	pseudogene	Chr3:3229801-3232730 (-)
C3H/HeJ	ENSMUSG00175005227	pseudogene	Chr3:3241822-3244751 (-)
C57BL/6NJ	ENSMUSG00215005479	pseudogene	Chr3:3223782-3226711 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010722	pseudogene	Chr3:2527291-2530198 (-)
CAST/EiJ	ENSTCUG00005000316	pseudogene	Chr3:3301234-3304163 (-)
CBA/J	ENSMUSG00210000836	pseudogene	Chr3:3222153-3225082 (-)
DBA/2J	ENSMUSG00185000583	pseudogene	Chr3:3227127-3230056 (-)
FVB/NJ	ENSMUSG00205006106	pseudogene	Chr3:3051026-3053955 (-)
JF1/MsJ	ENSUMUG00000011123	pseudogene	Chr3:3182136-3185995 (-)
LP/J	ENSMUSG00230000160	pseudogene	Chr3:5149607-5152536 (-)
NOD/ShiLtJ	ENSMUSG00190023805	pseudogene	Chr3:3232983-3235912 (-)
NZO/HlLtJ	ENSMUSG00225001634	pseudogene	Chr3:7688672-7691601 (-)
PWK/PhJ	ENSLUMG00010008535	pseudogene	Chr3:3206784-3210643 (-)
SPRET/EiJ	ENSMSPG00010000162	pseudogene	Chr3:3084961-3088813 (-)
WSB/EiJ	ENSIUOG00005000808	pseudogene	Chr3:3287965-3290894 (-)

Homology

• Gene Tree
  Gm6162
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000103733 (Evidence)
• NCBI Gene
  620570

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103733	Ensembl Gene Model | MGI Sequence Detail	2930	C57BL/6J
transcript	ENSMUST00000194870	Ensembl | MGI Sequence Detail	2930	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm6162:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr32532	Chr3:6234861-6234866 (-)	-1,980 bp