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Gm5533 Gene Detail
Summary
  • Symbol
    Gm5533
  • Name
    predicted gene 5533
Location &
Maps
more
  • Sequence Map
    Chr1:181679130-181681042 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 84.92 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    158 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647595
 lncRNA gene Chr1:181679130-181681042 (-)
129S1/SvImJ ENSMUSG00200023959
 lncRNA gene Chr1:179439666-179441282 (-)
A/J ENSMUSG00195044815
 lncRNA gene Chr1:179037298-179038914 (-)
AKR/J ENSMUSG00220022109
 lncRNA gene Chr1:178291823-178293438 (-)
BALB/cJ ENSMUSG00180039624
 lncRNA gene Chr1:179090983-179092598 (-)
C3H/HeJ ENSMUSG00175041138
 lncRNA gene Chr1:179266701-179268317 (-)
C57BL/6NJ ENSMUSG00215027976
 lncRNA gene Chr1:178492421-178494036 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004576
 lincRNA gene Chr1:171730934-171732573 (-)
CAST/EiJ ENSTCUG00005044186
 lncRNA gene Chr1:177024275-177025884 (-)
CBA/J ENSMUSG00210019445
 lncRNA gene Chr1:178931726-178933341 (-)
DBA/2J ENSMUSG00185038097
 lncRNA gene Chr1:183551145-183552760 (-)
FVB/NJ ENSMUSG00205038733
 lncRNA gene Chr1:177982278-177983894 (-)
JF1/MsJ ENSUMUG00000005912
 lncRNA gene Chr1:182531264-182532878 (-)
LP/J ENSMUSG00230033107
 lncRNA gene Chr1:183098956-183100571 (-)
NOD/ShiLtJ ENSMUSG00190036938
 lncRNA gene Chr1:178953849-178955464 (-)
NZO/HlLtJ ENSMUSG00225012010
 lncRNA gene Chr1:186856326-186857947 (-)
PWK/PhJ ENSLUMG00010017337
 lncRNA gene Chr1:177797845-177799461 (-)
SPRET/EiJ ENSMSPG00010037089
 lncRNA gene Chr1:181268000-181269624 (-)
WSB/EiJ ENSIUOG00005011817
 lncRNA gene Chr1:178147552-178149167 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000056699 Ensembl Gene Model | MGI Sequence Detail 1913 C57BL/6J ±  kb
transcript ENSMUST00000070987 Ensembl | MGI Sequence Detail 1631 Not Applicable  
polypeptide Q8C9X0 UniProt | EBI | MGI Sequence Detail 119 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory