Rpl7a-ps2 Pseudogene Detail

Summary

• Symbol
  Rpl7a-ps2
• Name
  ribosomal protein L7A, pseudogene 2
• Synonyms
  Gm4809

• Feature Type
  pseudogene
• IDs
  MGI:3647594
  NCBI Gene: 217924
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:115554027-115554754 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 62.59 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  256 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647594	pseudogene	Chr12:115554027-115554816 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195049768	pseudogene	Chr12:110182827-110183297 (+)
AKR/J	ENSMUSG00220038871	pseudogene	Chr12:107824613-107825385 (+)
BALB/cJ	ENSMUSG00180052674	pseudogene	Chr12:110470018-110470791 (+)
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215049882	pseudogene	Chr12:108421956-108422729 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210036199	pseudogene	Chr12:108891629-108892401 (+)
CBA/J	ENSMUSG00210043815	pseudogene	Chr12:108714852-108715625 (+)
DBA/2J	ENSMUSG00185014689	pseudogene	Chr12:110962180-110962950 (+)
FVB/NJ	ENSMUSG00205046929	pseudogene	Chr12:108502853-108503323 (+)
JF1/MsJ	ENSUMUG00000029935	pseudogene	Chr12:115290581-115291354 (+)
LP/J	ENSMUSG00230048500	pseudogene	Chr12:117645879-117646652 (+)
NOD/ShiLtJ	ENSMUSG00190032475	pseudogene	Chr12:107260294-107261067 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010022994	pseudogene	Chr12:111275642-111276112 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Rpl7a-ps2
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  1

• Ensembl
  ENSMUSG00000106283 (Evidence)
• NCBI Gene
  217924

Representative Sequences			Length	Strain/Species
genomic	217924	NCBI Gene Model | MGI Sequence Detail	728	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;