Gm8750 Pseudogene Detail

Summary

• Symbol
  Gm8750
• Name
  predicted pseudogene 8750

• Feature Type
  pseudogene
• IDs
  MGI:3647542
  NCBI Gene: 667662
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:35619775-35622703 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 18.66 cM
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647542	pseudogene	Chr17:35619643-35624497 (+)
129S1/SvImJ	ENSMUSG00200052125	pseudogene	Chr17:31369086-31371984 (+)
A/J	ENSMUSG00195047847	pseudogene	Chr17:32423641-32426556 (+)
AKR/J	ENSMUSG00220052865	pseudogene	Chr17:31239445-31242356 (+)
BALB/cJ	ENSMUSG00180046172	pseudogene	Chr17:31793459-31796376 (+)
C3H/HeJ	ENSMUSG00175044592	pseudogene	Chr17:31125540-31128445 (+)
C57BL/6NJ	ENSMUSG00215053816	pseudogene	Chr17:31209340-31212252 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012390	pseudogene	Chr9:41618182-41640467 (-)
CAST/EiJ	ENSTCUG00005052342	pseudogene	Chr17:32231227-32234226 (+)
CBA/J	ENSMUSG00210052682	pseudogene	Chr17:30947640-30950548 (+)
DBA/2J	ENSMUSG00185055430	pseudogene	Chr17:33812650-33815561 (+)
FVB/NJ	ENSMUSG00205053845	pseudogene	Chr17:31506331-31509264 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230054698	pseudogene	Chr17:34722114-34770290 (+)
NOD/ShiLtJ	ENSMUSG00190053635	pseudogene	Chr17:31125519-31128449 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010043723	pseudogene	Chr17:30750694-30753602 (+)
SPRET/EiJ	ENSMSPG00010050920	pseudogene	Chr17:31974141-31977021 (+)
WSB/EiJ	ENSIUOG00005052250	pseudogene	Chr17:31900025-31902947 (+)

Homology

• Gene Tree
  Gm8750
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm8750
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000092560 (Evidence)
• NCBI Gene
  667662

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092560	Ensembl Gene Model | MGI Sequence Detail	2929	C57BL/6J
transcript	ENSMUST00000173278	Ensembl | MGI Sequence Detail	1537	Not Applicable

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:190754 Ermakova O, et al., Construction and phenotypic analysis of mice carrying a duplication of the major histocompatibility class I (MHC-I) locus. Mamm Genome. 2012 Aug;23(7-8):443-53