Gm8752 Pseudogene Detail

Summary

• Symbol
  Gm8752
• Name
  predicted pseudogene 8752

• Feature Type
  pseudogene
• IDs
  MGI:3647539
  NCBI Gene: 667669
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:35664832-35667902 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 18.67 cM
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  20

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647539	pseudogene	Chr17:35664832-35669697 (+)
129S1/SvImJ	ENSMUSG00200051444	pseudogene	Chr17:31368948-31371983 (+)
129S1/SvImJ	ENSMUSG00200052631	pseudogene	Chr17:31323737-31326809 (+)
A/J	ENSMUSG00195046721	pseudogene	Chr17:32454250-32457282 (+)
A/J	ENSMUSG00195049469	pseudogene	Chr17:32378404-32381512 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180043680	pseudogene	Chr17:31824068-31827103 (+)
BALB/cJ	ENSMUSG00180046951	pseudogene	Chr17:31748220-31751331 (+)
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215053955	pseudogene	Chr17:31209202-31212251 (+)
C57BL/6NJ	ENSMUSG00215054135	pseudogene	Chr17:31164001-31167073 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012391	pseudogene	Chr9:41618183-41640596 (-)
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185055494	pseudogene	Chr17:33843253-33846280 (+)
DBA/2J	ENSMUSG00185055925	pseudogene	Chr17:33767417-33770524 (+)
FVB/NJ	ENSMUSG00205053676	pseudogene	Chr17:31506193-31509263 (+)
FVB/NJ	ENSMUSG00205053863	pseudogene	Chr17:31461045-31464174 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230054715	pseudogene	Chr17:34812454-34815526 (+)
LP/J	ENSMUSG00230054924	pseudogene	Chr17:34857682-34860718 (+)
NOD/ShiLtJ	ENSMUSG00190054010	pseudogene	Chr17:31080159-31083292 (+)
NOD/ShiLtJ	ENSMUSG00190053708	pseudogene	Chr17:31125381-31128448 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010050002	pseudogene	Chr17:31974003-31977020 (+)
WSB/EiJ	ENSIUOG00005052028	pseudogene	Chr17:31945109-31948121 (+)

Homology

• Gene Tree
  Gm8752
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm8752
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000092278 (Evidence)
• NCBI Gene
  667669

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092278	Ensembl Gene Model | MGI Sequence Detail	3071	C57BL/6J
transcript	ENSMUST00000173427	Ensembl | MGI Sequence Detail	1694	Not Applicable

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:190754 Ermakova O, et al., Construction and phenotypic analysis of mice carrying a duplication of the major histocompatibility class I (MHC-I) locus. Mamm Genome. 2012 Aug;23(7-8):443-53