Gm7399 Pseudogene Detail

Summary

• Symbol
  Gm7399
• Name
  predicted gene 7399

• Feature Type
  pseudogene
• IDs
  MGI:3647495
  NCBI Gene: 664907
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:59642379-59643236 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 29.62 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  82 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647495	pseudogene	Chr10:59642236-59643565 (+)
129S1/SvImJ	ENSMUSG00200029934	pseudogene	Chr10:56306596-56307453 (+)
A/J	ENSMUSG00195029029	pseudogene	Chr10:56606367-56607224 (+)
AKR/J	ENSMUSG00220042753	pseudogene	Chr10:56311201-56312058 (+)
BALB/cJ	ENSMUSG00180027988	pseudogene	Chr10:56661388-56662245 (+)
C3H/HeJ	ENSMUSG00175026551	pseudogene	Chr10:56513924-56514781 (+)
C57BL/6NJ	ENSMUSG00215031488	pseudogene	Chr10:56259531-56260388 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210039001	pseudogene	Chr10:56392246-56393103 (+)
DBA/2J	ENSMUSG00185042791	pseudogene	Chr10:56739010-56739867 (+)
FVB/NJ	ENSMUSG00205037722	pseudogene	Chr10:56411358-56412215 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230024153	pseudogene	Chr10:58542254-58543111 (+)
NOD/ShiLtJ	ENSMUSG00190038857	pseudogene	Chr10:56724847-56725704 (+)
NZO/HlLtJ	ENSMUSG00225045813	pseudogene	Chr10:62823148-62824005 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005041859	pseudogene	Chr10:56296264-56297121 (+)

Homology

• Gene Tree
  Gm7399
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm7399
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000091941 (Evidence)
• NCBI Gene
  664907

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091941	Ensembl Gene Model | MGI Sequence Detail	858	C57BL/6J
transcript	ENSMUST00000032395	Ensembl | MGI Sequence Detail	858	Not Applicable

References

• Summaries
  All 12

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:97904 Makeyev AV, et al., HnRNP A3 genes and pseudogenes in the vertebrate genomes. J Exp Zoolog A Comp Exp Biol. 2005 Apr 1;303(4):259-71