Gm5708 Pseudogene Detail

Summary

• Symbol
  Gm5708
• Name
  predicted gene 5708

• Feature Type
  pseudogene
• IDs
  MGI:3647478
  NCBI Gene: 435727
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:34237458-34238326 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 16.68 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  146 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647478	pseudogene	Chr3:34237456-34238341 (+)
129S1/SvImJ	ENSMUSG00200006270	pseudogene	Chr3:30969186-30970080 (+)
A/J	ENSMUSG00195001423	pseudogene	Chr3:30971420-30972314 (+)
AKR/J	ENSMUSG00220000739	pseudogene	Chr3:31006560-31007445 (+)
BALB/cJ	ENSMUSG00180002877	pseudogene	Chr3:31089250-31090135 (+)
C3H/HeJ	ENSMUSG00175003863	pseudogene	Chr3:31001731-31002625 (+)
C57BL/6NJ	ENSMUSG00215001565	pseudogene	Chr3:31363284-31364169 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010798	pseudogene	Chr3:29114035-29114906 (+)
CAST/EiJ	ENSTCUG00005025623	pseudogene	Chr3:30858330-30859214 (+)
CBA/J	ENSMUSG00210001765	pseudogene	Chr3:31049954-31050848 (+)
DBA/2J	ENSMUSG00185001843	pseudogene	Chr3:31292552-31293437 (+)
FVB/NJ	ENSMUSG00205008823	pseudogene	Chr3:30465702-30466587 (+)
JF1/MsJ	ENSUMUG00000006130	pseudogene	Chr3:30729740-30730623 (+)
LP/J	ENSMUSG00230024719	pseudogene	Chr3:33212200-33213094 (+)
NOD/ShiLtJ	ENSMUSG00190001433	pseudogene	Chr3:31279388-31280273 (+)
NZO/HlLtJ	ENSMUSG00225007396	pseudogene	Chr3:35830184-35831078 (+)
PWK/PhJ	ENSLUMG00010037249	pseudogene	Chr3:30787231-30788113 (+)
SPRET/EiJ	ENSMSPG00010000959	pseudogene	Chr3:31168938-31169827 (+)
WSB/EiJ	ENSIUOG00005014315	pseudogene	Chr3:31284365-31285259 (+)

Homology

• Gene Tree
  Gm5708
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm5708
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000105739 (Evidence)
• NCBI Gene
  435727

Representative Sequences			Length	Strain/Species
genomic	435727	NCBI Gene Model | MGI Sequence Detail	869	C57BL/6J

References

• Summaries
  All 7

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426