Gm5329 Pseudogene Detail

Summary

• Symbol
  Gm5329
• Name
  predicted gene 5329

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3647426
  NCBI Gene: 102633076
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:31671530-31671992 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 19.34 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  35 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647426	pseudogene	Chr7:31671527-31671994 (-)
129S1/SvImJ	ENSMUSG00200026843	pseudogene	Chr7:21066971-21067001 (-)
A/J	ENSMUSG00195049388	pseudogene	Chr7:24184978-24185440 (-)
AKR/J	ENSMUSG00220032084	pseudogene	Chr7:12395530-12395992 (-)
BALB/cJ	ENSMUSG00180020652	pseudogene	Chr7:21794708-21794738 (-)
C3H/HeJ	ENSMUSG00175040198	pseudogene	Chr7:22816304-22816334 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	ENSMUSG00205021573	pseudogene	Chr7:22173818-22174280 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230016196	pseudogene	Chr7:30743155-30743617 (-)
NOD/ShiLtJ	ENSMUSG00190008745	pseudogene	Chr7:21459323-21459353 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010006285	pseudogene	Chr7:21280566-21281028 (-)
WSB/EiJ	ENSIUOG00005008882	pseudogene	Chr7:21849805-21850015 (-)

Homology

• Gene Tree
  Gm5329
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  2

• Ensembl
  ENSMUSG00000100926 (Evidence)
• NCBI Gene
  102633076

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100926	Ensembl Gene Model | MGI Sequence Detail	463	C57BL/6J
transcript	ENSMUST00000186898	Ensembl | MGI Sequence Detail	463	Not Applicable
polypeptide	XP_036009521	RefSeq | MGI Sequence Detail	155	C57BL/6J

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;