Gm7334 Pseudogene Detail

Summary

• Symbol
  Gm7334
• Name
  predicted gene 7334

• Feature Type
  pseudogene
• IDs
  MGI:3647393
  NCBI Gene: 654432
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:51005716-51006471 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 26.33 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647393	pseudogene	Chr17:51005553-51006920 (+)
129S1/SvImJ	ENSMUSG00200028964	pseudogene	Chr17:46221536-46222291 (+)
A/J	ENSMUSG00195022880	pseudogene	Chr17:47701727-47702482 (+)
AKR/J	ENSMUSG00220037950	pseudogene	Chr17:46701753-46702508 (+)
BALB/cJ	ENSMUSG00180027277	pseudogene	Chr17:47458011-47458766 (+)
C3H/HeJ	ENSMUSG00175016493	pseudogene	Chr17:46765375-46766130 (+)
C57BL/6NJ	ENSMUSG00215037425	pseudogene	Chr17:46334114-46334869 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0020883	protein coding gene	Chr16:73488156-73507312 (-)
CAST/EiJ	ENSTCUG00005026649	pseudogene	Chr17:47515353-47516374 (+)
CBA/J	ENSMUSG00210039872	pseudogene	Chr17:46514914-46515669 (+)
DBA/2J	ENSMUSG00185030288	pseudogene	Chr17:49414059-49414814 (+)
FVB/NJ	ENSMUSG00205053022	pseudogene	Chr17:46993210-46993965 (+)
JF1/MsJ	ENSUMUG00000040673	pseudogene	Chr17:49108357-49109465 (+)
LP/J	ENSMUSG00230042037	pseudogene	Chr17:50333016-50333771 (+)
NOD/ShiLtJ	ENSMUSG00190018714	pseudogene	Chr17:46490951-46491706 (+)
NZO/HlLtJ	ENSMUSG00225043871	pseudogene	Chr17:52557576-52558331 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005027930	pseudogene	Chr17:47380559-47381314 (+)

Homology

• Gene Tree
  Gm7334
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  7 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000044645 (Evidence)
• NCBI Gene
  654432

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000044645	Ensembl Gene Model | MGI Sequence Detail	756	C57BL/6J
transcript	ENSMUST00000061681	Ensembl | MGI Sequence Detail	756	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm7334:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr145159	Chr17:51005570-51005581 (+)	-140 bp