Gm6333 Pseudogene Detail

Summary

• Symbol
  Gm6333
• Name
  predicted gene 6333

• Feature Type
  pseudogene
• IDs
  MGI:3647384
  NCBI Gene: 622567
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:126728982-126729777 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 73.85 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  157 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647384	pseudogene	Chr10:126728963-126729821 (+)
129S1/SvImJ	ENSMUSG00200013879	pseudogene	Chr10:123081465-123082258 (+)
A/J	ENSMUSG00195017003	pseudogene	Chr10:123545909-123546704 (+)
AKR/J	ENSMUSG00220006764	pseudogene	Chr10:123150083-123150876 (+)
BALB/cJ	ENSMUSG00180011439	pseudogene	Chr10:123537006-123537801 (+)
C3H/HeJ	ENSMUSG00175006186	pseudogene	Chr10:123534851-123535644 (+)
C57BL/6NJ	ENSMUSG00215021850	pseudogene	Chr10:123147019-123147814 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041569	pseudogene	Chr10:122503577-122504372 (+)
CBA/J	ENSMUSG00210009347	pseudogene	Chr10:123359007-123359800 (+)
DBA/2J	ENSMUSG00185027775	pseudogene	Chr10:123505102-123505897 (+)
FVB/NJ	ENSMUSG00205025979	pseudogene	Chr10:122765085-122765878 (+)
JF1/MsJ	ENSUMUG00000047139	pseudogene	Chr10:124799065-124799860 (+)
LP/J	ENSMUSG00230034706	pseudogene	Chr10:125421958-125422751 (+)
NOD/ShiLtJ	ENSMUSG00190016300	pseudogene	Chr10:123587606-123588399 (+)
NZO/HlLtJ	ENSMUSG00225038160	pseudogene	Chr10:129629401-129630194 (+)
PWK/PhJ	ENSLUMG00010010511	pseudogene	Chr10:123258623-123259418 (+)
SPRET/EiJ	ENSMSPG00010037018	pseudogene	Chr10:125213940-125214735 (+)
WSB/EiJ	ENSIUOG00005009180	pseudogene	Chr10:123146170-123146965 (+)

Homology

• Gene Tree
  Gm6333
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000112423 (Evidence)
• NCBI Gene
  622567

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112423	Ensembl Gene Model | MGI Sequence Detail	796	C57BL/6J
transcript	ENSMUST00000218775	Ensembl | MGI Sequence Detail	796	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;