Gm5876 Pseudogene Detail

Summary

• Symbol
  Gm5876
• Name
  predicted gene 5876

• Feature Type
  pseudogene
• IDs
  MGI:3647377
  NCBI Gene: 545843
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:65972621-65973314 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 30.39 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  21

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647377	pseudogene	Chr6:65972618-65973523 (+)
129S1/SvImJ	ENSMUSG00200013718	pseudogene	Chr6:62891299-62891992 (+)
A/J	ENSMUSG00195043761	pseudogene	Chr6:62635782-62636475 (+)
AKR/J	ENSMUSG00220044123	pseudogene	Chr6:62117512-62118205 (+)
BALB/cJ	ENSMUSG00180036564	pseudogene	Chr6:62991705-62992398 (+)
C3H/HeJ	ENSMUSG00175049078	pseudogene	Chr6:114466499-114467192 (-)
C57BL/6NJ	ENSMUSG00215042650	pseudogene	Chr6:62964667-62965360 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011927	pseudogene	Chr6:60348338-60349051 (+)
CAST/EiJ	ENSTCUG00005034765	pseudogene	Chr6:63236349-63237042 (+)
CBA/J	ENSMUSG00210045755	pseudogene	Chr6:62781364-62782057 (+)
DBA/2J	ENSMUSG00185044305	pseudogene	Chr6:63352404-63353097 (+)
FVB/NJ	ENSMUSG00205032473	pseudogene	Chr6:62774588-62775281 (+)
JF1/MsJ	ENSUMUG00000037105	pseudogene	Chr6:62639299-62639993 (+)
LP/J	ENSMUSG00230025414	pseudogene	Chr6:64475023-64475716 (+)
LP/J	ENSMUSG00230018642	pseudogene	Chr18:86851264-86851506 (-)
NOD/ShiLtJ	ENSMUSG00190037102	pseudogene	Chr6:62654572-62655265 (+)
NZO/HlLtJ	ENSMUSG00225023736	pseudogene	Chr18:86732441-86732683 (-)
NZO/HlLtJ	ENSMUSG00225021711	pseudogene	Chr6:66468314-66469007 (+)
PWK/PhJ	ENSLUMG00010020525	pseudogene	Chr6:61886285-61886978 (+)
SPRET/EiJ	ENSMSPG00010026921	pseudogene	Chr6:63689768-63690461 (+)
WSB/EiJ	ENSIUOG00005026366	pseudogene	Chr6:63435284-63435978 (+)

Homology

• Gene Tree
  Gm5876
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000108100 (Evidence)
• NCBI Gene
  545843

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108100	Ensembl Gene Model | MGI Sequence Detail	694	C57BL/6J
transcript	ENSMUST00000203735	Ensembl | MGI Sequence Detail	243	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;