Gm6343 Pseudogene Detail

Summary

• Symbol
  Gm6343
• Name
  predicted gene 6343

• Feature Type
  pseudogene
• IDs
  MGI:3647371
  NCBI Gene: 622701
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:113897922-113898664 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 64.02 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  183 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647371	pseudogene	Chr13:113897723-113898668 (-)
129S1/SvImJ	ENSMUSG00200032966	pseudogene	Chr13:108362703-108363445 (-)
A/J	ENSMUSG00195013551	pseudogene	Chr13:108858292-108859030 (-)
AKR/J	ENSMUSG00220033242	pseudogene	Chr13:107309634-107310376 (-)
BALB/cJ	ENSMUSG00180030530	pseudogene	Chr13:109453654-109454396 (-)
C3H/HeJ	ENSMUSG00175028519	pseudogene	Chr13:109531211-109531953 (-)
C57BL/6NJ	ENSMUSG00215024090	pseudogene	Chr13:109558730-109559472 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026915	pseudogene	Chr13:108596834-108597576 (-)
CBA/J	ENSMUSG00210010720	pseudogene	Chr13:108879263-108880005 (-)
DBA/2J	ENSMUSG00185030932	pseudogene	Chr13:112633035-112633777 (-)
FVB/NJ	ENSMUSG00205007224	pseudogene	Chr13:108310136-108310874 (-)
JF1/MsJ	ENSUMUG00000019447	pseudogene	Chr13:112085818-112086556 (-)
LP/J	ENSMUSG00230011641	pseudogene	Chr13:122831594-122832336 (-)
NOD/ShiLtJ	ENSMUSG00190020809	pseudogene	Chr13:109151928-109152670 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010010721	pseudogene	Chr13:108128518-108129260 (-)
SPRET/EiJ	ENSMSPG00010017932	pseudogene	Chr13:109843191-109843938 (-)
WSB/EiJ	ENSIUOG00005009620	pseudogene	Chr13:108316006-108316748 (-)

Homology

• Gene Tree
  Gm6343
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000114962 (Evidence)
• NCBI Gene
  622701

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114962	Ensembl Gene Model | MGI Sequence Detail	743	C57BL/6J
transcript	ENSMUST00000225360	Ensembl | MGI Sequence Detail	743	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;