Gm6345 Pseudogene Detail

Summary

• Symbol
  Gm6345
• Name
  predicted gene 6345

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3647370
  NCBI Gene: 622708
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:170081618-170083308 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 76.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647370	pseudogene	Chr1:170081618-170083308 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	ENSMUSG00220032882	pseudogene	Chr1:166573262-166574952 (-)
BALB/cJ	ENSMUSG00180046189	pseudogene	Chr1:167141127-167142817 (-)
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215045234	pseudogene	Chr1:167022370-167024060 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036944	pseudogene	Chr1:160470679-160470872 (-)
CAST/EiJ	ENSTCUG00005046928	pseudogene	Chr1:165531338-165533027 (-)
CBA/J	ENSMUSG00210041953	pseudogene	Chr1:167106162-167107852 (-)
DBA/2J	ENSMUSG00185012087	pseudogene	Chr1:171322952-171324642 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000013617	pseudogene	Chr1:170466270-170467960 (-)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010035471	pseudogene	Chr1:165857340-165859030 (-)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm6345
• Find Mice (IMSR)
  0 strains or lines available

Expression

• cDNA Data
  1

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  1

• Ensembl
  ENSMUSG00000096964 (Evidence), ENSMUSG00000121407 (Evidence)
• NCBI Gene
  622708

Representative Sequences			Length	Strain/Species
genomic	622708	NCBI Gene Model | MGI Sequence Detail	1691	C57BL/6J
transcript	NR_151590	RefSeq | MGI Sequence Detail	1691	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm6345:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr14916	Chr1:170083290-170083330 (-)	-2 bp