Gm5263 Pseudogene Detail

Summary

• Symbol
  Gm5263
• Name
  predicted gene 5263

• Feature Type
  pseudogene
• IDs
  MGI:3647343
  NCBI Gene: 383571
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:146296174-146296774 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 63.24 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647343	pseudogene	Chr1:146296033-146296912 (+)
129S1/SvImJ	ENSMUSG00200002701	pseudogene	Chr1:143759598-143760198 (+)
A/J	ENSMUSG00195014743	pseudogene	Chr1:143082762-143083362 (+)
AKR/J	ENSMUSG00220003497	pseudogene	Chr1:142859820-142860420 (+)
BALB/cJ	ENSMUSG00180033979	pseudogene	Chr1:143304346-143304946 (+)
C3H/HeJ	ENSMUSG00175003074	pseudogene	Chr1:143301629-143302229 (+)
C57BL/6NJ	ENSMUSG00215003741	pseudogene	Chr1:143237932-143238532 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013479	pseudogene	Chr1:141955640-141956240 (+)
CBA/J	ENSMUSG00210034084	pseudogene	Chr1:143220750-143221350 (+)
DBA/2J	ENSMUSG00185007367	pseudogene	Chr1:147554218-147554818 (+)
FVB/NJ	ENSMUSG00205029616	pseudogene	Chr1:142379629-142380229 (+)
JF1/MsJ	ENSUMUG00000013199	pseudogene	Chr1:146769916-146770536 (+)
LP/J	ENSMUSG00230000566	pseudogene	Chr1:147067511-147068111 (+)
NOD/ShiLtJ	ENSMUSG00190013508	pseudogene	Chr1:143058694-143059294 (+)
NZO/HlLtJ	ENSMUSG00225000183	pseudogene	Chr1:150818230-150818830 (+)
PWK/PhJ	ENSLUMG00010002096	pseudogene	Chr1:142131422-142131515 (+)
SPRET/EiJ	ENSMSPG00010005779	pseudogene	Chr1:145078764-145079363 (+)
WSB/EiJ	ENSIUOG00005024101	pseudogene	Chr1:142661979-142662579 (+)

Homology

• Gene Tree
  Gm5263
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Gene trapped
  1
• Genomic Mutations
  2 involving Gm5263
• Incidental Mutations
  APF
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000090323 (Evidence)
• NCBI Gene
  383571

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090323	Ensembl Gene Model | MGI Sequence Detail	601	C57BL/6J
transcript	ENSMUST00000163646	Ensembl | MGI Sequence Detail	601	Not Applicable

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14