Gm5262 Pseudogene Detail

Summary

• Symbol
  Gm5262
• Name
  predicted gene 5262

• Feature Type
  pseudogene
• IDs
  MGI:3647342
  NCBI Gene: 383570
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:145059632-145060627 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 63.24 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  176 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647342	pseudogene	Chr1:145059613-145060828 (+)
129S1/SvImJ	ENSMUSG00200008486	pseudogene	Chr1:142532815-142533810 (+)
A/J	ENSMUSG00195017802	pseudogene	Chr1:141855273-141856268 (+)
AKR/J	ENSMUSG00220003488	pseudogene	Chr1:141611306-141612301 (+)
BALB/cJ	ENSMUSG00180011754	pseudogene	Chr1:142064130-142065125 (+)
C3H/HeJ	ENSMUSG00175007065	pseudogene	Chr1:142072690-142073685 (+)
C57BL/6NJ	ENSMUSG00215022429	pseudogene	Chr1:141993548-141994543 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009293	pseudogene	Chr1:136338014-136339015 (+)
CAST/EiJ	ENSTCUG00005013469	pseudogene	Chr1:140770759-140771754 (+)
CBA/J	ENSMUSG00210014468	pseudogene	Chr1:141993395-141994390 (+)
DBA/2J	ENSMUSG00185007357	pseudogene	Chr1:146312742-146313737 (+)
FVB/NJ	ENSMUSG00205002672	pseudogene	Chr1:141199997-141200992 (+)
JF1/MsJ	ENSUMUG00000013259	pseudogene	Chr1:145562676-145563684 (+)
LP/J	ENSMUSG00230000491	pseudogene	Chr1:145826140-145827135 (+)
NOD/ShiLtJ	ENSMUSG00190002997	pseudogene	Chr1:141831289-141832284 (+)
NZO/HlLtJ	ENSMUSG00225000117	pseudogene	Chr1:149591440-149592435 (+)
PWK/PhJ	ENSLUMG00010002095	pseudogene	Chr1:140902011-140903019 (+)
SPRET/EiJ	ENSMSPG00010005770	pseudogene	Chr1:143885920-143886915 (+)
WSB/EiJ	ENSIUOG00005028926	pseudogene	Chr1:141416612-141417607 (+)

Homology

• Gene Tree
  Gm5262
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm5262
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000097130 (Evidence)
• NCBI Gene
  383570

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097130	Ensembl Gene Model | MGI Sequence Detail	996	C57BL/6J
transcript	ENSMUST00000180655	Ensembl | MGI Sequence Detail	996	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm5262:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr9212	Chr1:145059557-145059567 (+)	-70 bp