Gm5186 Pseudogene Detail

Summary

• Symbol
  Gm5186
• Name
  predicted gene 5186

• Feature Type
  pseudogene
• IDs
  MGI:3647307
  NCBI Gene: 382626
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:97530408-97531327 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 47.71 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  183 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647307	pseudogene	Chr12:97529419-97531355 (-)
129S1/SvImJ	ENSMUSG00200017922	pseudogene	Chr12:89325377-89326296 (-)
A/J	ENSMUSG00195022253	pseudogene	Chr12:91870610-91871529 (-)
AKR/J	ENSMUSG00220018192	pseudogene	Chr12:89761011-89761930 (-)
BALB/cJ	ENSMUSG00180015805	pseudogene	Chr12:91013864-91014783 (-)
C3H/HeJ	ENSMUSG00175036232	pseudogene	Chr12:93653090-93654009 (-)
C57BL/6NJ	ENSMUSG00215017629	pseudogene	Chr12:90313974-90314893 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006046	pseudogene	Chr12:89975091-89976011 (-)
CBA/J	ENSMUSG00210019111	pseudogene	Chr12:90687668-90688587 (-)
DBA/2J	ENSMUSG00185046170	pseudogene	Chr12:92462708-92463627 (-)
FVB/NJ	ENSMUSG00205000679	pseudogene	Chr12:89850464-89851383 (-)
JF1/MsJ	ENSUMUG00000025298	pseudogene	Chr12:97161826-97162745 (-)
LP/J	ENSMUSG00230004815	pseudogene	Chr12:99590590-99591509 (-)
NOD/ShiLtJ	ENSMUSG00190005446	pseudogene	Chr12:95465593-95466512 (+)
NZO/HlLtJ	ENSMUSG00225033778	pseudogene	Chr12:101301178-101302097 (-)
PWK/PhJ	ENSLUMG00010003590	pseudogene	Chr12:90656981-90657900 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005002165	pseudogene	Chr12:89677835-89678754 (-)

Homology

• Gene Tree
  Gm5186
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm5186
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000112590 (Evidence)
• NCBI Gene
  382626

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112590	Ensembl Gene Model | MGI Sequence Detail	920	C57BL/6J
transcript	ENSMUST00000218781	Ensembl | MGI Sequence Detail	920	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;